RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 ABLIM1O14639 778 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 ZMYND10O75800 440 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 FAM13AO94988 1023 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 HNRNPA1P09651 372 aaKnown RBP eCLIP19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 HARSP12081 509 aaKnown RBP19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 NCKAP1LP55160 1127 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 MCL1Q07820 350 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 ANKS3Q6ZW76 656 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 RTL10Q7L3V2 364 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 HAUS6Q7Z4H7 955 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 MYCT1Q8N699 235 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 CCSER1Q9C0I3 900 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 PLEKHA5Q9HAU0 1116 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 PARVGQ9HBI0 331 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 CNTN3Q9P232 1028 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 FBXW11Q9UKB1 542 aa19.18■□□□□ 0.66
SBDSP1-203ENST00000437201 NPHP3-ACAD11A0A0J9YXS1 232 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 TBCAO75347 108 aaKnown RBP19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 ASGR2P07307 311 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 MYBP10242 640 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 PLCG1P19174 1290 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 SYT1P21579 422 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 GBP2P32456 591 aaPredicted RBP19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 DDIT3P35638 169 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 TXLNAP40222 546 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 TDGQ13569 410 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 RAB33AQ14088 237 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 DHX8Q14562 1220 aaKnown RBP19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 UVSSAQ2YD98 709 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 LARP4BQ92615 738 aaKnown RBP19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 RAD54LQ92698 747 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 NXPE3Q969Y0 559 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 ZNF707Q96C28 371 aaPredicted RBP19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 ZBTB45Q96K62 511 aaPredicted RBP19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 REEP2Q9BRK0 252 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 CCDC39Q9UFE4 941 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 BACE2Q9Y5Z0 518 aa19.17■□□□□ 0.66
SBDSP1-203ENST00000437201 PODXLO00592 558 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 XYLBO75191 536 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 CLTAP09496 248 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 HOXA9P31269 272 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 LIG4P49917 911 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 ZNF131P52739 623 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 KARSQ15046 597 aaKnown RBP19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 PPM1LQ5SGD2 360 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 GOLGA2P5Q9HBQ8 144 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 BLOC1S4Q9NUP1 217 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 EPS15L1Q9UBC2 864 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 MTRRQ9UBK8 725 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 NUB1Q9Y5A7 615 aa19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 ZFP37Q9Y6Q3 630 aaPredicted RBP19.16■□□□□ 0.66
SBDSP1-203ENST00000437201 K7ENM7 598 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 HNRNPDLO14979 420 aaKnown RBP19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 SYN3O14994 580 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 TRAK2O60296 914 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 OR1D2P34982 312 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 NUBP1P53384 320 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 CACNB1Q02641 598 aaPredicted RBP19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 MCM6Q14566 821 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 KRI1Q8N9T8 703 aaKnown RBP19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 ZMAT2Q96NC0 199 aaKnown RBP19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 TSPAN18Q96SJ8 248 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 ZHX3Q9H4I2 956 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 ZSCAN16Q9H4T2 348 aaPredicted RBP19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 KCNK12Q9HB15 430 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 STK17AQ9UEE5 414 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 TBX20Q9UMR3 447 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 SRPRBQ9Y5M8 271 aaKnown RBP19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 CLIC4Q9Y696 253 aa19.15■□□□□ 0.66
SBDSP1-203ENST00000437201 PLXNA3P51805 1871 aa19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 H7C4K7 107 aa19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 K7ELQ4 463 aaPredicted RBP19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 C8AP07357 584 aa19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 TKTP29401 623 aaKnown RBP19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 GRIN1Q05586 938 aa19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 SOX4Q06945 474 aaPredicted RBP19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 PTPAQ15257 358 aa19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 SLC10A6Q3KNW5 377 aa19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 FEZF2Q8TBJ5 459 aa19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 IRF2BPLQ9H1B7 796 aa19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 MFSD1Q9H3U5 465 aa19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 CDY1Q9Y6F8 540 aa19.14■□□□□ 0.65
SBDSP1-203ENST00000437201 XPOTO43592 962 aaKnown RBP19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 PIGRP01833 764 aa19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 POU2F2P09086 479 aa19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 MARCKSP29966 332 aaPredicted RBP19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 AVPR2P30518 371 aa19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 BRCC3P46736 316 aa19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 PTPN5P54829 565 aa19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 RESTQ13127 1097 aa19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 AXDND1Q5T1B0 1012 aaPredicted RBP19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 CD300LGQ6UXG3 332 aa19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 C3orf58Q8NDZ4 430 aa19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 APPL2Q8NEU8 664 aa19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 MORC2Q9Y6X9 1032 aaPredicted RBP19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 DENND4AQ7Z401 1863 aa19.13■□□□□ 0.65
SBDSP1-203ENST00000437201 MTCL1Q9Y4B5 1905 aaKnown RBP19.12■□□□□ 0.65
SBDSP1-203ENST00000437201 OGTO15294 1046 aa19.12■□□□□ 0.65
SBDSP1-203ENST00000437201 LAMP2P13473 410 aa19.12■□□□□ 0.65
SBDSP1-203ENST00000437201 FSHRP23945 695 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms