RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 PCDHB2Q9Y5E7 798 aa11.97□□□□□ -0.49
HMGCL-204ENST00000436439 BICDL2A1A5D9 508 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 GOLGA6L6A8MZA4 724 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 C2CD4DB7Z1M9 353 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 EIF3DO15371 548 aaKnown RBP eCLIP11.96□□□□□ -0.49
HMGCL-204ENST00000436439 USO1O60763 962 aaKnown RBP11.96□□□□□ -0.49
HMGCL-204ENST00000436439 HIP1RO75146 1068 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 FAM13AO94988 1023 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 EPCAMP16422 314 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 CCNE1P24864 410 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 RAB27AP51159 221 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
HMGCL-204ENST00000436439 RNASELQ05823 741 aaKnown RBP11.96□□□□□ -0.49
HMGCL-204ENST00000436439 SIGLEC14Q08ET2 396 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 RAD51AP2Q09MP3 1159 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 ALCAMQ13740 583 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 EMC2Q15006 297 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 PTPN21Q16825 1174 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 BMT2Q1RMZ1 405 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 RARS2Q5T160 578 aaKnown RBP11.96□□□□□ -0.49
HMGCL-204ENST00000436439 SPATA1Q5VX52 437 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 CENPPQ6IPU0 288 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 SRGAP1Q7Z6B7 1085 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.96□□□□□ -0.49
HMGCL-204ENST00000436439 MRPL10Q7Z7H8 261 aaKnown RBP11.96□□□□□ -0.49
HMGCL-204ENST00000436439 SFR1Q86XK3 245 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 RNF149Q8NC42 400 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 SLC22A17Q8WUG5 538 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 KCNN1Q92952 543 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 PHOX2BQ99453 314 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 ADAM7Q9H2U9 754 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 ST6GALNAC4Q9H4F1 302 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 RSAD1Q9HA92 442 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 KCNG1Q9UIX4 513 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 IRAK3Q9Y616 596 aa11.96□□□□□ -0.49
HMGCL-204ENST00000436439 UBE4BO95155 1302 aa11.96□□□□□ -0.5
HMGCL-204ENST00000436439 ZNF500O60304 480 aaPredicted RBP11.95□□□□□ -0.5
HMGCL-204ENST00000436439 PLS3P13797 630 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 SCP2P22307 547 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 VCPP55072 806 aaKnown RBP11.95□□□□□ -0.5
HMGCL-204ENST00000436439 TPM4P67936 248 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 ITIH3Q06033 890 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 SARM1Q6SZW1 724 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 MYCT1Q8N699 235 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 SMG8Q8ND04 991 aaKnown RBP11.95□□□□□ -0.5
HMGCL-204ENST00000436439 ZNF507Q8TCN5 953 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 NELFBQ8WX92 580 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 RSPH1Q8WYR4 309 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 HPS3Q969F9 1004 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 PGBD4Q96DM1 585 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 NTPCRQ9BSD7 190 aaKnown RBP11.95□□□□□ -0.5
HMGCL-204ENST00000436439 STRA6Q9BX79 667 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 EIF2AQ9BY44 585 aaKnown RBP11.95□□□□□ -0.5
HMGCL-204ENST00000436439 HSD3B7Q9H2F3 369 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 SMOC2Q9H3U7 446 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 CTNND2Q9UQB3 1225 aa11.95□□□□□ -0.5
HMGCL-204ENST00000436439 MTCL1Q9Y4B5 1905 aaKnown RBP11.95□□□□□ -0.5
HMGCL-204ENST00000436439 AP5Z1O43299 807 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 PPP1R37O75864 691 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 PDGFBP01127 241 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-204ENST00000436439 POMCP01189 267 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 CDC25BP30305 580 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 ABCD1P33897 745 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 PLCB2Q00722 1185 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 LRRC63Q05C16 580 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 PTPN14Q15678 1187 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 KLHL10Q6JEL2 608 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 CES5AQ6NT32 575 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 TTI2Q6NXR4 508 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 STXBP4Q6ZWJ1 553 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 ZNF720Q7Z2F6 126 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 FBXL6Q8N531 539 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 ASAP3Q8TDY4 903 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 SCFD1Q8WVM8 642 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 TCP11Q8WWU5 503 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 CPB2Q96IY4 423 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 RNF39Q9H2S5 420 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 ZHX3Q9H4I2 956 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 MRPL44Q9H9J2 332 aaKnown RBP11.94□□□□□ -0.5
HMGCL-204ENST00000436439 MIOSQ9NXC5 875 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 NFE2L3Q9Y4A8 694 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 HES2Q9Y543 173 aa11.94□□□□□ -0.5
HMGCL-204ENST00000436439 SFI1A8K8P3 1242 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 NRP1O14786 923 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 ASAP2O43150 1006 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 TSPAN1O60635 241 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 LILRB3O75022 631 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 ZNF18P17022 549 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 ZNF75DP51815 510 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 CASP5P51878 434 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 NCKAP1LP55160 1127 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 PTENP60484 403 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 TCF15Q12870 199 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 CAPSQ13938 189 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 AMHR2Q16671 573 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 ZCWPW2Q504Y3 356 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 KIAA1841Q6NSI8 718 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 SUGP1Q8IWZ8 645 aaKnown RBP11.93□□□□□ -0.5
HMGCL-204ENST00000436439 KREMEN2Q8NCW0 462 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms