RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 UROC1Q96N76 676 aa15.75■□□□□ 0.11
LINC01006-204ENST00000435354 TIPINQ9BVW5 301 aa15.75■□□□□ 0.11
LINC01006-204ENST00000435354 CCDC94Q9BW85 323 aaPredicted RBP15.75■□□□□ 0.11
LINC01006-204ENST00000435354 MFSD1Q9H3U5 465 aa15.75■□□□□ 0.11
LINC01006-204ENST00000435354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC01006-204ENST00000435354 MTRRQ9UBK8 725 aa15.75■□□□□ 0.11
LINC01006-204ENST00000435354 ANHXE9PGG2 379 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 H0Y858 1186 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 C8AP07357 584 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 HNRNPA1P09651 372 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC01006-204ENST00000435354 LAMP2P13473 410 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 PLS3P13797 630 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 KCNE1P15382 129 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 TKTP29401 623 aaKnown RBP15.74■□□□□ 0.11
LINC01006-204ENST00000435354 OR1D2P34982 312 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 BRCC3P46736 316 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 CLCN5P51795 746 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 YARSP54577 528 aaKnown RBP15.74■□□□□ 0.11
LINC01006-204ENST00000435354 SLC12A3P55017 1021 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 NTHL1P78549 312 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 TMEM119Q4V9L6 283 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 LIN9Q5TKA1 542 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 ARL6IP4Q66PJ3 421 aaKnown RBP15.74■□□□□ 0.11
LINC01006-204ENST00000435354 PDXDC1Q6P996 788 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 MPZL3Q6UWV2 235 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 GRASPQ7Z6J2 395 aaPredicted RBP15.74■□□□□ 0.11
LINC01006-204ENST00000435354 SLC44A3Q8N4M1 653 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 TMEM161BQ8NDZ6 487 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 FLCNQ8NFG4 579 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 SPIRE2Q8WWL2 714 aa15.74■□□□□ 0.11
LINC01006-204ENST00000435354 DDX27Q96GQ7 796 aaKnown RBP15.74■□□□□ 0.11
LINC01006-204ENST00000435354 ZBTB45Q96K62 511 aaPredicted RBP15.74■□□□□ 0.11
LINC01006-204ENST00000435354 TOPORSQ9NS56 1045 aaPredicted RBP15.74■□□□□ 0.11
LINC01006-204ENST00000435354 NPHP3-ACAD11A0A0J9YXS1 232 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 CCL16O15467 120 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 PI15O43692 258 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 PLA2G4BP0C869 781 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 MAPTP10636 758 aaKnown RBP15.73■□□□□ 0.11
LINC01006-204ENST00000435354 FSHRP23945 695 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 HOXA9P31269 272 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 HTR4Q13639 388 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 ARSHQ5FYA8 562 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 PPM1LQ5SGD2 360 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 AXDND1Q5T1B0 1012 aaPredicted RBP15.73■□□□□ 0.11
LINC01006-204ENST00000435354 SIX5Q8N196 739 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 KCTD17Q8N5Z5 321 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 ST13P5Q8NFI4 369 aaPredicted RBP15.73■□□□□ 0.11
LINC01006-204ENST00000435354 SLC7A14Q8TBB6 771 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 LRRC15Q8TF66 581 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 C18orf25Q96B23 403 aaPredicted RBP15.73■□□□□ 0.11
LINC01006-204ENST00000435354 TBC1D32Q96NH3 1257 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 ACAP3Q96P50 834 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 TCHPQ9BT92 498 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 CNTN3Q9P232 1028 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 FBXL21Q9UKT6 434 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 SMC3Q9UQE7 1217 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 BACE2Q9Y5Z0 518 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 CDY1Q9Y6F8 540 aa15.73■□□□□ 0.11
LINC01006-204ENST00000435354 KRBA1A5PL33 1030 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 TOM1L1O75674 476 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 CFHP08603 1231 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 HARSP12081 509 aaKnown RBP15.72■□□□□ 0.11
LINC01006-204ENST00000435354 MCM2P49736 904 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
LINC01006-204ENST00000435354 SEZ6Q53EL9 994 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 ATOH1Q92858 354 aaPredicted RBP15.72■□□□□ 0.11
LINC01006-204ENST00000435354 NXPE3Q969Y0 559 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 HAPLN2Q9GZV7 340 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 UPF2Q9HAU5 1272 aaKnown RBP15.72■□□□□ 0.11
LINC01006-204ENST00000435354 SLC38A7Q9NVC3 462 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 ANKFY1Q9P2R3 1169 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 WNT16Q9UBV4 365 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 MYH15Q9Y2K3 1946 aa15.72■□□□□ 0.11
LINC01006-204ENST00000435354 PODXLO00592 558 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 TRAPPC3O43617 180 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 POU2F2P09086 479 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 SRFP11831 508 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 AOC1P19801 751 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 STRN3Q13033 797 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 NOLC1Q14978 699 aaKnown RBP eCLIP15.71■□□□□ 0.11
LINC01006-204ENST00000435354 SLC10A6Q3KNW5 377 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.11
LINC01006-204ENST00000435354 ZPBP2Q6X784 338 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 ANKS3Q6ZW76 656 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 ITFG1Q8TB96 612 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 CDK5RAP3Q96JB5 506 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 RPP25Q9BUL9 199 aaKnown RBP15.71■□□□□ 0.11
LINC01006-204ENST00000435354 IRF2BPLQ9H1B7 796 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 HCFC1R1Q9NWW0 138 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 KCND2Q9NZV8 630 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 CDH7Q9ULB5 785 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 NUMBLQ9Y6R0 609 aa15.71■□□□□ 0.11
LINC01006-204ENST00000435354 ZFHX2Q9C0A1 2572 aaPredicted RBP15.71■□□□□ 0.1
LINC01006-204ENST00000435354 USP34Q70CQ2 3546 aa15.71■□□□□ 0.1
LINC01006-204ENST00000435354 XYLBO75191 536 aa15.7■□□□□ 0.1
LINC01006-204ENST00000435354 SMTNP53814 917 aa15.7■□□□□ 0.1
LINC01006-204ENST00000435354 NCKAP1LP55160 1127 aa15.7■□□□□ 0.1
LINC01006-204ENST00000435354 GRIN1Q05586 938 aa15.7■□□□□ 0.1
LINC01006-204ENST00000435354 MCL1Q07820 350 aa15.7■□□□□ 0.1
LINC01006-204ENST00000435354 UVSSAQ2YD98 709 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 206.2 ms