RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TGM2P21980 687 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 TXKP42681 527 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 CRKP46108 304 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 INHBEP58166 350 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SLC4A8Q2Y0W8 1093 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 FSCBQ5H9T9 825 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 RALGPS1Q5JS13 557 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 KLC3Q6P597 504 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PPP1R14CQ8TAE6 165 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 UBA5Q9GZZ9 404 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 RRAGDQ9NQL2 400 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 DNPEPQ9ULA0 475 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ZBTB21Q9ULJ3 1066 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ITM2BQ9Y287 266 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 TRIP11Q15643 1979 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ECE2O60344 883 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PRDM1O75626 825 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 MMP10P09238 476 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 CTDSPL2Q05D32 466 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 NFIAQ12857 509 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 FRG1Q14331 258 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ARHGEF16Q5VV41 709 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 COL23A1Q86Y22 540 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 RDH11Q8TC12 318 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF507Q8TCN5 953 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SHC3Q92529 594 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ARHGEF1Q92888 912 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 RNPC3Q96LT9 517 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 MED15Q96RN5 788 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PIGSQ96S52 555 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ERP44Q9BS26 406 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 TTYH3Q9C0H2 523 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 BHMT2Q9H2M3 363 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 RANBP17Q9H2T7 1088 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 FAF1Q9UNN5 650 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 GK3PQ14409 553 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 TTC23LQ6PF05 361 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 HAUS6Q7Z4H7 955 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 TDRPQ86YL5 185 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 TNIP2Q8NFZ5 429 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 JADE3Q92613 823 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 STAMBPL1Q96FJ0 436 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ZIM3Q96PE6 472 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 LRRC2Q9BYS8 371 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 GOLPH3LQ9H4A5 285 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 MSCO60682 206 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 GDF11O95390 407 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 FGGP02679 453 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 MCF2P10911 925 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 GHRP10912 638 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 KRT5P13647 590 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PAMP19021 973 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ACAT1P24752 427 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 NLRP11P59045 1033 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 RPL26P61254 145 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 RBL2Q08999 1139 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 XRCC4Q13426 336 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SNRNP35Q16560 246 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PTPN21Q16825 1174 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 FOXD4L6Q3SYB3 417 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 KLHDC7AQ5VTJ3 777 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 TYW1BQ6NUM6 668 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 FOXD4L3Q6VB84 417 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 RMDN3Q96TC7 470 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 WWP1Q9H0M0 922 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 NFU1Q9UMS0 254 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 KCNJ14Q9UNX9 436 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 GRIN3BO60391 1043 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 FSBPO95073 299 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 CYP3A5P20815 502 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 OSBPP22059 807 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 MAPK4P31152 587 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PKN1Q16512 942 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 BEND6Q5SZJ8 279 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PLPPR4Q7Z2D5 763 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 EMID1Q96A84 441 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PUS3Q9BZE2 481 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 FAM217BQ9NTX9 383 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SLC9A2Q9UBY0 812 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ADAM28Q9UKQ2 775 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 CORO1CQ9ULV4 474 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ASTN2O75129 1339 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 FAM47DPA6NHR8 397 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 KIF28PB7ZC32 967 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 CLTAP09496 248 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 ARL4AP40617 200 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 SPARCL1Q14515 664 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 MTHFD1LQ6UB35 978 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 RGS9BPQ6ZS82 235 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 DTX3LQ8TDB6 740 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 INPP5DQ92835 1189 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 PARD6BQ9BYG5 372 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 TRIM15Q9C019 465 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 PCDH9Q9HC56 1237 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 PHIPQ8WWQ0 1821 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 VPS4BO75351 444 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 GMNNO75496 209 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 PIGRP01833 764 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 SDC4P31431 198 aa3.98□□□□□ -1.77
SHPRH-205ENST00000433355 GPC3P51654 580 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms