RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 AVPR2P30518 371 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 CUL4AQ13619 759 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 FAM173BQ6P4H8 233 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 MPZL3Q6UWV2 235 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 GET4Q7L5D6 327 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-202ENST00000430200 CEP57Q86XR8 500 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 SUGP1Q8IWZ8 645 aaKnown RBP12.93□□□□□ -0.34
HDAC4-202ENST00000430200 SYT2Q8N9I0 419 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-202ENST00000430200 DRC1Q96MC2 740 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 FIZ1Q96SL8 496 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 MRPL4Q9BYD3 311 aaKnown RBP12.93□□□□□ -0.34
HDAC4-202ENST00000430200 RHOBTB2Q9BYZ6 727 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 RAB34Q9BZG1 259 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 IKZF4Q9H2S9 585 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 TMEM134Q9H6X4 195 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.93□□□□□ -0.34
HDAC4-202ENST00000430200 HCFC1R1Q9NWW0 138 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 ANKFY1Q9P2R3 1169 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 MTRRQ9UBK8 725 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 H3BQV1 296 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 NR1I2O75469 434 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 PLS3P13797 630 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 NPR3P17342 541 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 PLCG1P19174 1290 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 TNFSF9P41273 254 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 MRE11P49959 708 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 NCKAP1LP55160 1127 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 SPAG1Q07617 926 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 KARSQ15046 597 aaKnown RBP12.92□□□□□ -0.34
HDAC4-202ENST00000430200 SLC39A4Q6P5W5 647 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.92□□□□□ -0.34
HDAC4-202ENST00000430200 OTOP3Q7RTS5 596 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 GPR65Q8IYL9 337 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 UBALD2Q8IYN6 164 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 ZDHHC7Q9NXF8 308 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 CNTN3Q9P232 1028 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 DUSP12Q9UNI6 340 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 SMC3Q9UQE7 1217 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 SSX2IPQ9Y2D8 614 aa12.92□□□□□ -0.34
HDAC4-202ENST00000430200 KRBA1A5PL33 1030 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 TISP43B9A030 160 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 CCL16O15467 120 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 PI15O43692 258 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 B3GAT3O94766 335 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 C8AP07357 584 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 CXCL8P10145 99 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 MCF2P10911 925 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 GBP2P32456 591 aaPredicted RBP12.91□□□□□ -0.34
HDAC4-202ENST00000430200 GUCY2FP51841 1108 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 RESTQ13127 1097 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 HTR4Q13639 388 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 MCM6Q14566 821 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 NOLC1Q14978 699 aaKnown RBP eCLIP12.91□□□□□ -0.34
HDAC4-202ENST00000430200 PTPAQ15257 358 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 SLC10A6Q3KNW5 377 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 ARL6IP4Q66PJ3 421 aaKnown RBP12.91□□□□□ -0.34
HDAC4-202ENST00000430200 GRASPQ7Z6J2 395 aaPredicted RBP12.91□□□□□ -0.34
HDAC4-202ENST00000430200 ITFG1Q8TB96 612 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 SLC7A14Q8TBB6 771 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 SPIRE2Q8WWL2 714 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 NTPCRQ9BSD7 190 aaKnown RBP12.91□□□□□ -0.34
HDAC4-202ENST00000430200 RPP25Q9BUL9 199 aaKnown RBP12.91□□□□□ -0.34
HDAC4-202ENST00000430200 KCNH6Q9H252 994 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 PLEKHA4Q9H4M7 779 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 EPS15L1Q9UBC2 864 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 KIF3AQ9Y496 699 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 CLIC4Q9Y696 253 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 CDY1Q9Y6F8 540 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 SPTBN4Q9H254 2564 aa12.91□□□□□ -0.34
HDAC4-202ENST00000430200 WDR27A2RRH5 827 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 VPS37CA5D8V6 355 aaPredicted RBP12.9□□□□□ -0.34
HDAC4-202ENST00000430200 PODXLO00592 558 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 PPEF2O14830 753 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 KCNE1P15382 129 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 OR1D2P34982 312 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 ZNF131P52739 623 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 ROR1Q01973 937 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 TDGQ13569 410 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 DHX8Q14562 1220 aaKnown RBP12.9□□□□□ -0.34
HDAC4-202ENST00000430200 SF3A1Q15459 793 aaKnown RBP12.9□□□□□ -0.34
HDAC4-202ENST00000430200 SLC5A9Q2M3M2 681 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 SPECC1Q5M775 1068 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 LARP1BQ659C4 914 aaKnown RBP12.9□□□□□ -0.34
HDAC4-202ENST00000430200 GPBP1Q86WP2 473 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 HDAC7Q8WUI4 952 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 FGF14Q92915 247 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 ACSF2Q96CM8 615 aaPredicted RBP12.9□□□□□ -0.34
HDAC4-202ENST00000430200 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
HDAC4-202ENST00000430200 STK24Q9Y6E0 443 aa12.9□□□□□ -0.34
HDAC4-202ENST00000430200 ANHXE9PGG2 379 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 H0Y858 1186 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 TBC1D4O60343 1298 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 TOM1L1O75674 476 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 VNN2O95498 520 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 C1RP00736 705 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 CFHP08603 1231 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 CREMQ03060 361 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 MCL1Q07820 350 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms