RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 CASZ1Q86V15 1759 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 HLA-DRAP01903 254 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 ITGB3P05106 788 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 THP07101 528 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 KCNA10Q16322 511 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 HAS1Q92839 578 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 HPDLQ96IR7 371 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 GPR20Q99678 358 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 TRIM62Q9BVG3 475 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 CDY2AQ9Y6F7 541 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 VEGFBP49765 207 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 ITGA7Q13683 1181 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 C8orf74Q6P047 294 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 GABPB2Q8TAK5 448 aaPredicted RBP13.76□□□□□ -0.21
PTCH1-207ENST00000429896 GLYCTKQ8IVS8 523 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 PANX2Q96RD6 677 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 SEPT5Q99719 369 aaPredicted RBP13.76□□□□□ -0.21
PTCH1-207ENST00000429896 LCMT1Q9UIC8 334 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 MRPL9Q9BYD2 267 aaKnown RBP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 EBAG9O00559 213 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 MFAP3LO75121 409 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 SMPD1P17405 629 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 PSMA2P25787 234 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 SNX17Q15036 470 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 CTU1Q7Z7A3 348 aaKnown RBP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 ANKRD42Q8N9B4 389 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 PPP1R13LQ8WUF5 828 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 EHD2Q9NZN4 543 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 HDAC6Q9UBN7 1215 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 GIPC1O14908 333 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 MAFO75444 373 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 KRT1P04264 644 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 ITGB3BPQ13352 177 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 KAZNQ674X7 775 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 YAF2Q8IY57 180 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 FEZ2Q9UHY8 353 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 P4HA2O15460 535 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 SLC4A1P02730 911 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 PDGFRBP09619 1106 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 VPS41P49754 854 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 TADA2BQ86TJ2 420 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 SKA2Q8WVK7 121 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 ZBED3Q96IU2 234 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 NCAPGQ9BPX3 1015 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 SLC8A2Q9UPR5 921 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 HPSEQ9Y251 543 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 HYOU1Q9Y4L1 999 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 ICAM3P32942 547 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 CDO1Q16878 200 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 TTC31Q49AM3 519 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 OLFML2BQ68BL8 750 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 RPTORQ8N122 1335 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 KCTD6Q8NC69 237 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 ETNPPLQ8TBG4 499 aa13.75□□□□□ -0.21
PTCH1-207ENST00000429896 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 LIMA1Q9UHB6 759 aaKnown RBP13.75□□□□□ -0.21
PTCH1-207ENST00000429896 C2CD2LO14523 706 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 ZBTB22O15209 634 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 SOX5P35711 763 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 BTBD8Q5XKL5 378 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 TRIM72Q6ZMU5 477 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
PTCH1-207ENST00000429896 ENGASEQ8NFI3 743 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 VPS37BQ9H9H4 285 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 OLFML3Q9NRN5 406 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 ABCF3Q9NUQ8 709 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 APEX2Q9UBZ4 518 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 NRBP1Q9UHY1 535 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 ACKR2O00590 384 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 IVLP07476 585 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 CCL23P55773 120 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 NXNQ6DKJ4 435 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 ALKBH5Q6P6C2 394 aaKnown RBP13.74□□□□□ -0.21
PTCH1-207ENST00000429896 SARM1Q6SZW1 724 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 CELF4Q9BZC1 486 aaKnown RBP13.74□□□□□ -0.21
PTCH1-207ENST00000429896 SNTG2Q9NY99 539 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 COL1A2P08123 1366 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 ASGR1P07306 291 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 GNL1P36915 607 aaPredicted RBP13.74□□□□□ -0.21
PTCH1-207ENST00000429896 CCL14Q16627 93 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 GRK7Q8WTQ7 553 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 STAP1Q9ULZ2 295 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 PCDHA13Q9Y5I0 950 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 MOXD2PA6NHM9 499 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 STK25O00506 426 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 FYB2Q5VWT5 728 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 NIF3L1Q9GZT8 377 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 FAN1Q9Y2M0 1017 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 ZBTB39O15060 712 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 URODP06132 367 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 SARNPP82979 210 aaKnown RBP13.74□□□□□ -0.21
PTCH1-207ENST00000429896 UHMK1Q8TAS1 419 aaKnown RBP13.74□□□□□ -0.21
PTCH1-207ENST00000429896 COL20A1Q9P218 1284 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 PYCARDQ9ULZ3 195 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 SART1O43290 800 aaKnown RBP13.74□□□□□ -0.21
PTCH1-207ENST00000429896 B3GAT3O94766 335 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 ALDH2P05091 517 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 NOP14P78316 857 aaKnown RBP13.74□□□□□ -0.21
PTCH1-207ENST00000429896 PDE1CQ14123 709 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms