RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 KLHL11Q9NVR0 708 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 USP20Q9Y2K6 914 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 CCDC88AQ3V6T2 1871 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 ZBTB39O15060 712 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 GRAP2O75791 330 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 KRT33BQ14525 404 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 SGSM1Q2NKQ1 1148 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 EARS2Q5JPH6 523 aaKnown RBP7.55□□□□□ -1.2
ATXN3-204ENST00000429774 GJB7Q6PEY0 223 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 CXCL17Q6UXB2 119 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 SPATS2Q86XZ4 545 aaKnown RBP7.55□□□□□ -1.2
ATXN3-204ENST00000429774 ELMO3Q96BJ8 720 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 IFT43Q96FT9 208 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 CABS1Q96KC9 395 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 COLEC11Q9BWP8 271 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 CYP39A1Q9NYL5 469 aa7.55□□□□□ -1.2
ATXN3-204ENST00000429774 UBR2Q8IWV8 1755 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 SLC16A3O15427 465 aaKnown RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 SKIP12755 728 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 NUMBP49757 651 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 MAP2K5Q13163 448 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 BRD3Q15059 726 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 CCDC170Q8IYT3 715 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 EIF3CLB5ME19 914 aaKnown RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 POC1B-GALNT4F8VUJ3 575 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 SLC26A4O43511 780 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 ZMYND10O75800 440 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 ODC1P11926 461 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 ALDH3A1P30838 453 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 NAMPTP43490 491 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 HHATQ5VTY9 493 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 ANKRD42Q8N9B4 389 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 ZNF564Q8TBZ8 553 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 FAM71BQ8TC56 605 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 ABTB1Q969K4 478 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 ZNF512Q96ME7 567 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 DEFB118Q96PH6 123 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 PANX2Q96RD6 677 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 PASKQ96RG2 1323 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 EIF3CQ99613 913 aaKnown RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 GOLGA8KD6RF30 607 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 PFDN6O15212 129 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 EIF3DO15371 548 aaKnown RBP eCLIP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 CPP00450 1065 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 CASP4P49662 377 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 CELF3Q5SZQ8 465 aaKnown RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 IQSEC1Q6DN90 963 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 MTMR12Q9C0I1 747 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 SP110Q9HB58 689 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 STRIP2Q9ULQ0 834 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 ZC3H4Q9UPT8 1303 aaKnown RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 A0A087WUV0 522 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 CYTH3O43739 400 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 ONECUT3O60422 494 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 HLA-DRAP01903 254 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 CLTAP09496 248 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 PRKAR2AP13861 404 aaKnown RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 NPTX2P47972 431 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 FMO5P49326 533 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 FKBP1BP68106 108 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 GUCY2DQ02846 1103 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 KDELC2Q7Z4H8 507 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 BHMTQ93088 406 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 SMC6Q96SB8 1091 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 TRIM56Q9BRZ2 755 aaKnown RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 TJP2Q9UDY2 1190 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 NEMP1O14524 444 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 CCL23P55773 120 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 MAP7Q14244 749 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 TMCO4Q5TGY1 634 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 REPS2Q8NFH8 660 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 BPIFA3Q9BQP9 254 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 DHX35Q9H5Z1 703 aaKnown RBP7.54□□□□□ -1.2
ATXN3-204ENST00000429774 MYH3P11055 1940 aa7.54□□□□□ -1.2
ATXN3-204ENST00000429774 LRRC37A3O60309 1634 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 ZBED1O96006 694 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 RECQLP46063 649 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 THOC5Q13769 683 aaKnown RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 SAMD3Q8N6K7 520 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 WHAMMQ8TF30 809 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 RNF25Q96BH1 459 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 FAF2Q96CS3 445 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 TSR3Q9UJK0 312 aaKnown RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 EVI5O60447 810 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 MPZL3Q6UWV2 235 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 MMS22LQ6ZRQ5 1243 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 ALKBH8Q96BT7 664 aaKnown RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 AGPAT1Q99943 283 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 SPON2Q9BUD6 331 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 GOLGA8CPA6NN73 597 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 RHOBTB3O94955 611 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 AMHP03971 560 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 CYP11B2P19099 503 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 SDC4P31431 198 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 NNMTP40261 264 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 FLT3LGP49771 235 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 MRPS25P82663 173 aaKnown RBP7.53□□□□□ -1.2
ATXN3-204ENST00000429774 GIT2Q14161 759 aa7.53□□□□□ -1.2
ATXN3-204ENST00000429774 SMAD1Q15797 465 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms