RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 RBAK-RBAKDNI3L0D1 243 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 COPEO14579 308 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 UBE4BO95155 1302 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 MYBL1P10243 752 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 KITP10721 976 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 MARK3P27448 753 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 ITIH4Q14624 930 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 PSMD6Q15008 389 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 HIF1AQ16665 826 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 PPP1R2P3Q6NXS1 205 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 SYDE1Q6ZW31 735 aaPredicted RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 TAS1R2Q8TE23 839 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 LRRC15Q8TF66 581 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 KAT2BQ92831 832 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 ACSF2Q96CM8 615 aaPredicted RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 TMEM8AQ9HCN3 771 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 NGRNQ9NPE2 291 aaKnown RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 TOPORSQ9NS56 1045 aaPredicted RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 COX16Q9P0S2 106 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 STOML1Q9UBI4 398 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 ASTN1O14525 1302 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 RRM1P23921 792 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 SLFN12LQ6IEE8 588 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 HIPK4Q8NE63 616 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 ZKSCAN4Q969J2 545 aaPredicted RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 FAF2Q96CS3 445 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 ANKRD36BP1Q96IX9 119 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 RIT2Q99578 217 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 KIAA1586Q9HCI6 787 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 RNF146Q9NTX7 359 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 PCDHB2Q9Y5E7 798 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 PCDHA10Q9Y5I2 948 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 DCDC2CA8MYV0 355 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 P4HA2O15460 535 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 SAT1P21673 171 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 PSMC4P43686 418 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 STRIP1Q5VSL9 837 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 ACAD10Q6JQN1 1059 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 BTNL9Q6UXG8 535 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 PTF1AQ7RTS3 328 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 EIF1ADQ8N9N8 165 aaKnown RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 ATP11CQ8NB49 1132 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 CDHR1Q96JP9 859 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 PPP1R16BQ96T49 567 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 UBN1Q9NPG3 1134 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 OPLAHO14841 1288 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 MAP3K7O43318 606 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 CALB1P05937 261 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 CCND1P24385 295 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 TARSP26639 723 aaKnown RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 SFNP31947 248 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 YTHDF3Q7Z739 585 aaKnown RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 LONP2Q86WA8 852 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 ZNF354CQ86Y25 554 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 DTX3LQ8TDB6 740 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 SLC5A5Q92911 643 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 FAM163AQ96GL9 167 aaPredicted RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 QTRT2Q9H974 415 aaKnown RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 PARVAQ9NVD7 372 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 GEMIN8Q9NWZ8 242 aaKnown RBP13.39□□□□□ -0.27
CPNE4-201ENST00000429747 SLC9A2Q9UBY0 812 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 HEY1Q9Y5J3 304 aa13.39□□□□□ -0.27
CPNE4-201ENST00000429747 CCDC195A0A1B0GUA6 201 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 PPP1R11O60927 126 aaPredicted RBP13.38□□□□□ -0.27
CPNE4-201ENST00000429747 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
CPNE4-201ENST00000429747 MAP7D1Q3KQU3 841 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 FLAD1Q8NFF5 587 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 TRIM4Q9C037 500 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 ABCF3Q9NUQ8 709 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 HESX1Q9UBX0 185 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 ZHX2Q9Y6X8 837 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 ZBED1O96006 694 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 KRT10P13645 584 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 SMAD1Q15797 465 aaKnown RBP13.38□□□□□ -0.27
CPNE4-201ENST00000429747 SLC27A3Q5K4L6 730 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 ALG3Q92685 438 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 PGM2Q96G03 612 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 NLRP4Q96MN2 994 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 TUBB6Q9BUF5 446 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 SLC13A1Q9BZW2 595 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 YY1AP1Q9H869 796 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 MEIS2O14770 477 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 KIAA0391O15091 583 aaKnown RBP13.38□□□□□ -0.27
CPNE4-201ENST00000429747 PRPSAP2O60256 369 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 LPXNO60711 386 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 HLA-DRAP01903 254 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 GZMAP12544 262 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 KLHL38Q2WGJ6 581 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 PPP6R3Q5H9R7 873 aaPredicted RBP13.38□□□□□ -0.27
CPNE4-201ENST00000429747 OTOP1Q7RTM1 612 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 AS3MTQ9HBK9 375 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 STK32BQ9NY57 414 aa13.38□□□□□ -0.27
CPNE4-201ENST00000429747 MAGED2Q9UNF1 606 aaPredicted RBP13.38□□□□□ -0.27
CPNE4-201ENST00000429747 TMEM150BA6NC51 233 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 KRT37O76014 449 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 LDHAP00338 332 aaKnown RBP13.37□□□□□ -0.27
CPNE4-201ENST00000429747 ZCWPW2Q504Y3 356 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms