RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 RBM12BQ8IXT5 1001 aaKnown RBP7.69□□□□□ -1.18
PTPRK-211ENST00000429595 GPRC5AQ8NFJ5 357 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 EDC3Q96F86 508 aaKnown RBP7.69□□□□□ -1.18
PTPRK-211ENST00000429595 CAPN10Q9HC96 672 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 SLC6A20Q9NP91 592 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 JADE2Q9NQC1 790 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 MAPK8IP3Q9UPT6 1336 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 MAST2Q6P0Q8 1798 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 MUC3AQ02505 3323 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 A0A1W2PQU0 124 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 ANKRD18BA2A2Z9 1011 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 SNAP23O00161 211 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 KIAA0355O15063 1070 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 KRT37O76014 449 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 CNOT4O95628 575 aaKnown RBP7.68□□□□□ -1.18
PTPRK-211ENST00000429595 HIBADHP31937 336 aaKnown RBP7.68□□□□□ -1.18
PTPRK-211ENST00000429595 IRX3P78415 501 aaPredicted RBP7.68□□□□□ -1.18
PTPRK-211ENST00000429595 TREML2Q5T2D2 321 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 VPS37DQ86XT2 251 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 ZFPM1Q8IX07 1006 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 SLC44A5Q8NCS7 719 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 TBC1D22AQ8WUA7 517 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 CDK5RAP1Q96SZ6 601 aaKnown RBP7.68□□□□□ -1.18
PTPRK-211ENST00000429595 PRRX2Q99811 253 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.68□□□□□ -1.18
PTPRK-211ENST00000429595 VPS11Q9H270 941 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 BARX1Q9HBU1 254 aaPredicted RBP7.68□□□□□ -1.18
PTPRK-211ENST00000429595 GPR27Q9NS67 375 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 LAS1LQ9Y4W2 734 aaKnown RBP7.68□□□□□ -1.18
PTPRK-211ENST00000429595 EYSQ5T1H1 3165 aa7.68□□□□□ -1.18
PTPRK-211ENST00000429595 PRUNE2Q8WUY3 3088 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 DLX3O60479 287 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 PQBP1O60828 265 aaKnown RBP7.67□□□□□ -1.18
PTPRK-211ENST00000429595 LTFP02788 710 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 GDF5P43026 501 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 SELENOPP49908 381 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 NEXNQ0ZGT2 675 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 CHAF1AQ13111 956 aaPredicted RBP7.67□□□□□ -1.18
PTPRK-211ENST00000429595 KCTD13Q8WZ19 329 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 IER2Q9BTL4 223 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 MRIQ9BWK5 157 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 DEF6Q9H4E7 631 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 DLL4Q9NR61 685 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 MORF4L1Q9UBU8 362 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 MAST3O60307 1309 aa7.67□□□□□ -1.18
PTPRK-211ENST00000429595 LAMA2P24043 3122 aaKnown RBP7.66□□□□□ -1.18
PTPRK-211ENST00000429595 KRIT1O00522 736 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 DCXO43602 365 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 MAFKO60675 156 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 CTNND1O60716 968 aaKnown RBP7.66□□□□□ -1.18
PTPRK-211ENST00000429595 ZNF623O75123 536 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 KNG1P01042 644 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 AMHP03971 560 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 ID4P47928 161 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 EPHA10Q5JZY3 1008 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 SPDYAQ5MJ70 313 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 WDR78Q5VTH9 848 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 VASNQ6EMK4 673 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 PSRC1Q6PGN9 363 aaPredicted RBP7.66□□□□□ -1.18
PTPRK-211ENST00000429595 EEPD1Q7L9B9 569 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 TMEM199Q8N511 208 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 Q8TCH9 128 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 PHF20Q9BVI0 1012 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 PRKRIP1Q9H875 184 aaPredicted RBP7.66□□□□□ -1.18
PTPRK-211ENST00000429595 TELO2Q9Y4R8 837 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 UTYO14607 1347 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 SPEF2Q9C093 1822 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 DOCK3Q8IZD9 2030 aa7.66□□□□□ -1.18
PTPRK-211ENST00000429595 TIMP1P01033 207 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 HOXB7P09629 217 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 SLC5A1P13866 664 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 GYG1P46976 350 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 HMGA2P52926 109 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 LMOD3Q0VAK6 560 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 SPP2Q13103 211 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 SMAD2Q15796 467 aaKnown RBP7.65□□□□□ -1.18
PTPRK-211ENST00000429595 TAF7LQ5H9L4 462 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 MFSD5Q6N075 450 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 APOBEC3HQ6NTF7 200 aaKnown RBP7.65□□□□□ -1.18
PTPRK-211ENST00000429595 Q6ZUG5 572 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 USP53Q70EK8 1073 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 ZNF365Q70YC5 407 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 OTOP3Q7RTS5 596 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 GPR142Q7Z601 462 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 TRIM48Q8IWZ4 208 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 EPN3Q9H201 632 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 CNNM1Q9NRU3 951 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 TCAF1Q9Y4C2 921 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 MTCH2Q9Y6C9 303 aa7.65□□□□□ -1.18
PTPRK-211ENST00000429595 PLXNA1Q9UIW2 1896 aa7.64□□□□□ -1.19
PTPRK-211ENST00000429595 CYR61O00622 381 aa7.64□□□□□ -1.19
PTPRK-211ENST00000429595 MUSKO15146 869 aa7.64□□□□□ -1.19
PTPRK-211ENST00000429595 FGBP02675 491 aa7.64□□□□□ -1.19
PTPRK-211ENST00000429595 CKMP06732 381 aa7.64□□□□□ -1.19
PTPRK-211ENST00000429595 FGRP09769 529 aa7.64□□□□□ -1.19
PTPRK-211ENST00000429595 FAHP16930 419 aa7.64□□□□□ -1.19
PTPRK-211ENST00000429595 HMGCS2P54868 508 aa7.64□□□□□ -1.19
PTPRK-211ENST00000429595 RIPK4P57078 832 aa7.64□□□□□ -1.19
PTPRK-211ENST00000429595 CCNA1P78396 465 aa7.64□□□□□ -1.19
PTPRK-211ENST00000429595 IFIT5Q13325 482 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms