RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 BICD1Q96G01 975 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 SNX27Q96L92 541 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 REEP2Q9BRK0 252 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 ZSCAN16Q9H4T2 348 aaPredicted RBP11.13□□□□□ -0.63
COMMD1-202ENST00000427417 PIDD1Q9HB75 910 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 CNTN3Q9P232 1028 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 CLIC4Q9Y696 253 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 ZDBF2Q9HCK1 2354 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 TRIP11Q15643 1979 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 TRIOO75962 3097 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 NPHP3-ACAD11A0A0J9YXS1 232 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 K7ENM7 598 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 ABLIM1O14639 778 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 TRAK2O60296 914 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 PAPLNO95428 1278 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 PDGFBP01127 241 aaPredicted RBP11.12□□□□□ -0.63
COMMD1-202ENST00000427417 SPATA31D3P0C874 917 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 RPL17P18621 184 aaKnown RBP11.12□□□□□ -0.63
COMMD1-202ENST00000427417 FGFR3P22607 806 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 RPL9P32969 192 aaKnown RBP11.12□□□□□ -0.63
COMMD1-202ENST00000427417 DDIT3P35638 169 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 LIG4P49917 911 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 ZNF131P52739 623 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
COMMD1-202ENST00000427417 MCL1Q07820 350 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 RESTQ13127 1097 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 DHX8Q14562 1220 aaKnown RBP11.12□□□□□ -0.63
COMMD1-202ENST00000427417 MCM6Q14566 821 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 IER5LQ5T953 404 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 LIN9Q5TKA1 542 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 LILRA6Q6PI73 481 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 PRSS55Q6UWB4 352 aaPredicted RBP11.12□□□□□ -0.63
COMMD1-202ENST00000427417 SPATA31D4Q6ZUB0 917 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 ANKS3Q6ZW76 656 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 HAUS6Q7Z4H7 955 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
COMMD1-202ENST00000427417 SMG7Q92540 1137 aaKnown RBP11.12□□□□□ -0.63
COMMD1-202ENST00000427417 ASIC4Q96FT7 647 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 PRRX2Q99811 253 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 CLSTN3Q9BQT9 956 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 PRKD2Q9BZL6 878 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 ZHX3Q9H4I2 956 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 PLEKHA5Q9HAU0 1116 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 WDR6Q9NNW5 1121 aaKnown RBP11.12□□□□□ -0.63
COMMD1-202ENST00000427417 BLOC1S4Q9NUP1 217 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 STK17AQ9UEE5 414 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 LIMD1Q9UGP4 676 aa11.12□□□□□ -0.63
COMMD1-202ENST00000427417 SRPRBQ9Y5M8 271 aaKnown RBP11.12□□□□□ -0.63
COMMD1-202ENST00000427417 KMT2EQ8IZD2 1858 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 PODXLO00592 558 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 HNRNPDLO14979 420 aaKnown RBP11.11□□□□□ -0.63
COMMD1-202ENST00000427417 XPOTO43592 962 aaKnown RBP11.11□□□□□ -0.63
COMMD1-202ENST00000427417 STX6O43752 255 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 RFPL2O75678 378 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 ZMYND10O75800 440 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 CLTAP09496 248 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 PDIA4P13667 645 aaKnown RBP11.11□□□□□ -0.63
COMMD1-202ENST00000427417 IGFBP6P24592 240 aaPredicted RBP11.11□□□□□ -0.63
COMMD1-202ENST00000427417 HOXA9P31269 272 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 VCPP55072 806 aaKnown RBP11.11□□□□□ -0.63
COMMD1-202ENST00000427417 GRIN1Q05586 938 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 PTPAQ15257 358 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 RTL10Q7L3V2 364 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 FBXL6Q8N531 539 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 ZBTB45Q96K62 511 aaPredicted RBP11.11□□□□□ -0.63
COMMD1-202ENST00000427417 ZMAT2Q96NC0 199 aaKnown RBP11.11□□□□□ -0.63
COMMD1-202ENST00000427417 GOLGA2P5Q9HBQ8 144 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 MTRRQ9UBK8 725 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 FBXO2Q9UK22 296 aaPredicted RBP11.11□□□□□ -0.63
COMMD1-202ENST00000427417 FBXW11Q9UKB1 542 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 TBX20Q9UMR3 447 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 NUB1Q9Y5A7 615 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 BACE2Q9Y5Z0 518 aa11.11□□□□□ -0.63
COMMD1-202ENST00000427417 MORC2Q9Y6X9 1032 aaPredicted RBP11.11□□□□□ -0.63
COMMD1-202ENST00000427417 CLUHO75153 1309 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 VWA8A3KMH1 1905 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 DOCK6Q96HP0 2047 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 SYN3O14994 580 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 XYLBO75191 536 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 PIGRP01833 764 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 HNRNPA1P09651 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
COMMD1-202ENST00000427417 MARCKSP29966 332 aaPredicted RBP11.1□□□□□ -0.63
COMMD1-202ENST00000427417 HOXD11P31277 338 aaPredicted RBP11.1□□□□□ -0.63
COMMD1-202ENST00000427417 GBP2P32456 591 aaPredicted RBP11.1□□□□□ -0.63
COMMD1-202ENST00000427417 CEBPZQ03701 1054 aaKnown RBP11.1□□□□□ -0.63
COMMD1-202ENST00000427417 PPP2R3AQ06190 1150 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 SOX4Q06945 474 aaPredicted RBP11.1□□□□□ -0.63
COMMD1-202ENST00000427417 RAB33AQ14088 237 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 UVSSAQ2YD98 709 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 SLC10A6Q3KNW5 377 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 PPM1LQ5SGD2 360 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 RRAGBQ5VZM2 374 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 CCDC73Q6ZRK6 1079 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 PRSS33Q8NF86 280 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 SNX21Q969T3 373 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 ZNF707Q96C28 371 aaPredicted RBP11.1□□□□□ -0.63
COMMD1-202ENST00000427417 EPSTI1Q96J88 318 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 TSPAN18Q96SJ8 248 aa11.1□□□□□ -0.63
COMMD1-202ENST00000427417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms