RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 NFIL3Q16649 462 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 ZNF699Q32M78 642 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 TTC33Q6PID6 262 aaPredicted RBP11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 P3H2Q8IVL5 708 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 C10orf53Q8N6V4 93 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 NSUN7Q8NE18 718 aaKnown RBP11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 PGBD4Q96DM1 585 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 ZNF518AQ6AHZ1 1483 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 ZMYM3Q14202 1370 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 TRIM13O60858 407 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 MMP1P03956 469 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 RALBP11234 206 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 MDM1Q8TC05 714 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 TAF1DQ9H5J8 278 aaPredicted RBP11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 SYBUQ9NX95 663 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 ARHGEF37A1IGU5 675 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 K7ERI5 159 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 LCP1P13796 627 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 CRKLP46109 303 aaKnown RBP11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 SYTL3Q4VX76 610 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 SNX31Q8N9S9 440 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 LINC00301Q8NCQ3 95 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 USP33Q8TEY7 942 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 FAM213AQ9BRX8 229 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 BLOC1S6Q9UL45 172 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 C1orf232A0A0U1RR37 186 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 TRIM43BA6NCK2 446 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 LRRIQ3A6PVS8 624 aaPredicted RBP11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 EPB42P16452 691 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 ABATP80404 500 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 SHROOM1Q2M3G4 852 aaPredicted RBP11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 PCMTD2Q9NV79 361 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 MPP6Q9NZW5 540 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 AREL1O15033 823 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 SNPHO15079 494 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 EIF2AK2P19525 551 aaKnown RBP11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 ITGAXP20702 1163 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 CAV1Q03135 178 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 MOV10L1Q9BXT6 1211 aaKnown RBP11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 GOLPH3LQ9H4A5 285 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 TLR7Q9NYK1 1049 aaKnown RBP11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 POLG2Q9UHN1 485 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 ARL2BPQ9Y2Y0 163 aa11.94□□□□□ -0.5
POLR2J4-202ENST00000427076 PIPSLA2A3N6 862 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 ATP1A1P05023 1023 aaKnown RBP11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 APOA4P06727 396 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 HSMCR30P0CW71 290 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 CYP2C19P33261 490 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 RFX3P48380 749 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 EIF4A1P60842 406 aaKnown RBP11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 TP53BP2Q13625 1128 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 RCN1Q15293 331 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 ATP11CQ8NB49 1132 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 URGCPQ8TCY9 931 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 CNDP1Q96KN2 507 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 ZNF197O14709 1029 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 ZBTB39O15060 712 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 KCNQ3O43525 872 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 PRKAB2O43741 272 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 PRPF39Q86UA1 669 aaKnown RBP11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 LRRC49Q8IUZ0 686 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 TTC13Q8NBP0 860 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 WDR11Q9BZH6 1224 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 INSRP06213 1382 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 COL17A1Q9UMD9 1497 aaPredicted RBP11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 ARF4P18085 180 aaPredicted RBP11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 PHKA1P46020 1223 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 NME5P56597 212 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 TFDP2Q14188 446 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 PGBD2Q6P3X8 592 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 BBS7Q8IWZ6 715 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 HIC2Q96JB3 615 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 EPN3Q9H201 632 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 SLC9A2Q9UBY0 812 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 AMACRQ9UHK6 382 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 FAM182BQ5T319 152 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 C16orf89Q6UX73 402 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 ZNF589Q86UQ0 364 aaPredicted RBP11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 SLC25A41Q8N5S1 370 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 TRIM63Q969Q1 353 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 ERP27Q96DN0 273 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 PRAG1Q86YV5 1406 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 LOC100653049A0A140TA62 436 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 KRT34O76011 436 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 FAM107AO95990 144 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 TRIM49P0CI25 452 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 TRIM49CP0CI26 452 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 CDC27P30260 824 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 CSE1LP55060 971 aaKnown RBP11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 ABCE1P61221 599 aaKnown RBP11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 RPS7P62081 194 aaKnown RBP11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 CSNK2BP67870 215 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 PID1Q7Z2X4 250 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 SYTL1Q8IYJ3 562 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.93□□□□□ -0.52e-6■■□□□ 12.9
POLR2J4-202ENST00000427076 HDHD2Q9H0R4 259 aa11.93□□□□□ -0.5
POLR2J4-202ENST00000427076 USP1O94782 785 aa11.92□□□□□ -0.5
POLR2J4-202ENST00000427076 FEN1P39748 380 aaKnown RBP11.92□□□□□ -0.5
POLR2J4-202ENST00000427076 COG2Q14746 738 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms