RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 LCTP09848 1927 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 A0A0G2JMZ2 1700 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 CSDE1O75534 798 aaKnown RBP14.28□□□□□ -0.12
USP42-203ENST00000426246 ITGB5P18084 799 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 SCP2P22307 547 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 RRM1P23921 792 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 CHKAP35790 457 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 SPP2Q13103 211 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 UGCGQ16739 394 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 KLHL29Q96CT2 875 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 C12orf42Q96LP6 360 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 ACCSQ96QU6 501 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 C12orf65Q9H3J6 166 aaKnown RBP14.28□□□□□ -0.12
USP42-203ENST00000426246 SYNCQ9H7C4 482 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 EHMT1Q9H9B1 1298 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 COL20A1Q9P218 1284 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 DCTN4Q9UJW0 460 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 PASKQ96RG2 1323 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 TBX3O15119 743 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 USP2O75604 605 aaPredicted RBP14.28□□□□□ -0.12
USP42-203ENST00000426246 ETS1P14921 441 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 ATF2P15336 505 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 SCTRP47872 440 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 ZNF662Q6ZS27 426 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 REPS2Q8NFH8 660 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 SEMA4DQ92854 862 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 ADARB2Q9NS39 739 aaKnown RBP14.28□□□□□ -0.12
USP42-203ENST00000426246 NKIRAS1Q9NYS0 192 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 NXF1Q9UBU9 619 aaKnown RBP14.28□□□□□ -0.12
USP42-203ENST00000426246 ADRB2P07550 413 aa14.27□□□□□ -0.12
USP42-203ENST00000426246 TMEM253P0C7T8 217 aa14.27□□□□□ -0.12
USP42-203ENST00000426246 NSFP46459 744 aaKnown RBP14.27□□□□□ -0.12
USP42-203ENST00000426246 RWDD2BP57060 319 aa14.27□□□□□ -0.12
USP42-203ENST00000426246 SKOR1P84550 965 aa14.27□□□□□ -0.12
USP42-203ENST00000426246 CYB5D1Q6P9G0 228 aa14.27□□□□□ -0.12
USP42-203ENST00000426246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.27□□□□□ -0.12
USP42-203ENST00000426246 ZNF280CQ8ND82 737 aa14.27□□□□□ -0.12
USP42-203ENST00000426246 ADAMTS5Q9UNA0 930 aa14.27□□□□□ -0.12
USP42-203ENST00000426246 RPTORQ8N122 1335 aa14.27□□□□□ -0.12
USP42-203ENST00000426246 ECHS1P30084 290 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 LIG4P49917 911 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 DMP1Q13316 513 aaPredicted RBP14.27□□□□□ -0.13
USP42-203ENST00000426246 SLITRK6Q9H5Y7 841 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 RPAP3Q9H6T3 665 aaPredicted RBP14.27□□□□□ -0.13
USP42-203ENST00000426246 ZWILCHQ9H900 591 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 A8MUI8 341 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 RALAP11233 206 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 CNGA1P29973 690 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 WDR44Q5JSH3 913 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 NLRX1Q86UT6 975 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 PARP9Q8IXQ6 854 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 ZBTB45Q96K62 511 aaPredicted RBP14.27□□□□□ -0.13
USP42-203ENST00000426246 HSD17B14Q9BPX1 270 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 KIF9Q9HAQ2 790 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 AFG3L2Q9Y4W6 797 aa14.27□□□□□ -0.13
USP42-203ENST00000426246 PIK3CAP42336 1068 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 ITGA8P53708 1063 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 IRX4P78413 519 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 RNASELQ05823 741 aaKnown RBP14.26□□□□□ -0.13
USP42-203ENST00000426246 TRAF1Q13077 416 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 C9orf131Q5VYM1 1079 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 PABPC3Q9H361 631 aaKnown RBP14.26□□□□□ -0.13
USP42-203ENST00000426246 CDC42EP4Q9H3Q1 356 aaKnown RBP14.26□□□□□ -0.13
USP42-203ENST00000426246 SAYSD1Q9NPB0 183 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 C1orf112Q9NSG2 853 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 PCSK1NQ9UHG2 260 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 PNMA3Q9UL41 463 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 MAGED2Q9UNF1 606 aaPredicted RBP14.26□□□□□ -0.13
USP42-203ENST00000426246 FRMPD4Q14CM0 1322 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 TRAPPC3O43617 180 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 QARSP47897 775 aaKnown RBP14.26□□□□□ -0.13
USP42-203ENST00000426246 ZNF131P52739 623 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 MFAP3P55082 362 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 RPS6P62753 249 aaKnown RBP14.26□□□□□ -0.13
USP42-203ENST00000426246 KCNT1Q5JUK3 1230 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 SPOCK2Q92563 424 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 AGTPBP1Q9UPW5 1226 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 UBOX5O94941 541 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 DNAJC3Q13217 504 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 SEMA3FQ13275 785 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 INTS8Q75QN2 995 aaKnown RBP14.26□□□□□ -0.13
USP42-203ENST00000426246 MICAL1Q8TDZ2 1067 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 L3MBTL3Q96JM7 780 aaPredicted RBP14.26□□□□□ -0.13
USP42-203ENST00000426246 ZSWIM1Q9BR11 485 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 RNF19AQ9NV58 838 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 SNCAIPQ9Y6H5 919 aa14.26□□□□□ -0.13
USP42-203ENST00000426246 LRRD1A4D1F6 860 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 RASA4BC9J798 803 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 VWA5AO00534 786 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 RASA4O43374 803 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 SRGAP2CP0DJJ0 459 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 NOP14P78316 857 aaKnown RBP14.25□□□□□ -0.13
USP42-203ENST00000426246 ITIH3Q06033 890 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 HES6Q96HZ4 224 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 R3HDM2Q9Y2K5 976 aaKnown RBP14.25□□□□□ -0.13
USP42-203ENST00000426246 SGK1O00141 431 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 KIAA0391O15091 583 aaKnown RBP14.25□□□□□ -0.13
USP42-203ENST00000426246 CFHP08603 1231 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 PTENP60484 403 aa14.25□□□□□ -0.13
USP42-203ENST00000426246 KCNJ2P63252 427 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms