RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 NINJ2Q9NZG7 142 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 TMOD2Q9NZR1 351 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 KLHL14Q9P2G3 628 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 ARL2BPQ9Y2Y0 163 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 DENND3A2RUS2 1198 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 NFIBO00712 420 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 KRT16P08779 473 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 CETPP11597 493 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 EIF2AK2P19525 551 aaKnown RBP8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 TCEAL1Q15170 157 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 TMED2Q15363 201 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 KAZNQ674X7 775 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 SV2AQ7L0J3 742 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 RPAINQ86UA6 219 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 ATL2Q8NHH9 583 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 PARD3BQ8TEW8 1205 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 CKAP2Q8WWK9 683 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 RSRC1Q96IZ7 334 aaKnown RBP8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 CCDC77Q9BR77 488 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 COL20A1Q9P218 1284 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 SERPINA10Q9UK55 444 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 USP20Q9Y2K6 914 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 RASA4BC9J798 803 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 POC1B-GALNT4F8VUJ3 575 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 RASA4O43374 803 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 DIAPH2O60879 1101 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 MMP10P09238 476 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 GTF2BQ00403 316 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 SP4Q02446 784 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 ALCAMQ13740 583 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 UGCGQ16739 394 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 MASTLQ96GX5 879 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 RMDN2Q96LZ7 410 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 PITPNM3Q9BZ71 974 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 DCLK3Q9C098 648 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 ATP6V0A4Q9HBG4 840 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 KLHL11Q9NVR0 708 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 SPATA31A6Q5VVP1 1343 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 C10orf71Q711Q0 1435 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 A0A1B0GUA9 196 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 ENTPD3O75355 529 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 IVDP26440 423 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 CDC25CP30307 473 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 PDE6BP35913 854 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 CLEC16AQ2KHT3 1053 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 IZUMO3Q5VZ72 239 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 B3GNT9Q6UX72 402 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 BICD1Q96G01 975 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 GJD4Q96KN9 370 aaPredicted RBP8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 IFT74Q96LB3 600 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 TRAIPQ9BWF2 469 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 RANBP17Q9H2T7 1088 aaKnown RBP8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 TBX20Q9UMR3 447 aa8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.02□□□□□ -1.13
SMARCC1-202ENST00000425518 C21orf2O43822 256 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 SORBS3O60504 671 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 GJB6O95452 261 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 CD58P19256 250 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 BNIP1Q12981 228 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 SPP2Q13103 211 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 MTMR1Q13613 665 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 RHBDF2Q6PJF5 856 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 ARHGEF18Q6ZSZ5 1173 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 CDAN1Q8IWY9 1227 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 C12orf50Q8NA57 414 aaPredicted RBP8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 GRK7Q8WTQ7 553 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 IWS1Q96ST2 819 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 C11orf70Q9BRQ4 267 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 FAM213AQ9BRX8 229 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 MRIQ9BWK5 157 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 TMEM8AQ9HCN3 771 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 KMT5AQ9NQR1 393 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 SCAF8Q9UPN6 1271 aaKnown RBP8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 EXOC7Q9UPT5 735 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 BTAF1O14981 1849 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 PI4K2BG5E9Z4 385 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 DHX15O43143 795 aaKnown RBP8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 GRIN3BO60391 1043 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 NSFP46459 744 aaKnown RBP8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF268Q14587 947 aaPredicted RBP8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 TKFCQ3LXA3 575 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 VSIG1Q86XK7 387 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 MCOLN2Q8IZK6 566 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 NLGN1Q8N2Q7 840 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 KCNV2Q8TDN2 545 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 DDX1Q92499 740 aaKnown RBP8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 MIEF2Q96C03 454 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 ETNK1Q9HBU6 452 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 ATAD5Q96QE3 1844 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 MYH11P35749 1972 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 EIF4E1BA6NMX2 242 aaKnown RBP8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 ATP9AO75110 1047 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 FOXN2P32314 431 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 NPTX2P47972 431 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 DMP1Q13316 513 aaPredicted RBP8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 PTK6Q13882 451 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 C12orf56Q8IXR9 622 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 GBP7Q8N8V2 638 aaPredicted RBP8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 MAIP1Q8WWC4 291 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms