RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 LBRQ14739 615 aaKnown RBP13.53□□□□□ -0.24
CTCFL-204ENST00000422869 TMED2Q15363 201 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 SGSM1Q2NKQ1 1148 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 GNPTABQ3T906 1256 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 WASHC2DQ5SRD0 308 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 C1orf220Q5T0J3 134 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 LMNTD2Q8IXW0 634 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 FAM71AQ8IYT1 594 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 DYDC2Q96IM9 177 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 TSC22D3Q99576 134 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 SEL1LQ9UBV2 794 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 R3HDM2Q9Y2K5 976 aaKnown RBP13.53□□□□□ -0.24
CTCFL-204ENST00000422869 TISP43B9A030 160 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 TRAFD1O14545 582 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-204ENST00000422869 CYP26A1O43174 497 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 RAD21O60216 631 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 MYBL1P10243 752 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 ADCY8P40145 1251 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 GCLMP48507 274 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 PAPOLAP51003 745 aaKnown RBP13.53□□□□□ -0.24
CTCFL-204ENST00000422869 RAB27AP51159 221 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 HSPA2P54652 639 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 STAT4Q14765 748 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 ODR4Q5SWX8 454 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 RGS9BPQ6ZS82 235 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 C10orf82Q8WW14 230 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 STRA6Q9BX79 667 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 DCLK3Q9C098 648 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 PAPOLBQ9NRJ5 636 aaKnown RBP13.53□□□□□ -0.24
CTCFL-204ENST00000422869 ETAA1Q9NY74 926 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 USP20Q9Y2K6 914 aa13.53□□□□□ -0.24
CTCFL-204ENST00000422869 SMCHD1A6NHR9 2005 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 IGLV3-22A0A075B6J6 115 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 LRRD1A4D1F6 860 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 DCTN3O75935 186 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 MXRA7P84157 204 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 RBBP5Q15291 538 aaKnown RBP13.52□□□□□ -0.24
CTCFL-204ENST00000422869 SHROOM1Q2M3G4 852 aaPredicted RBP13.52□□□□□ -0.24
CTCFL-204ENST00000422869 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 TRABD2AQ86V40 505 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 RELL1Q8IUW5 271 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 FAM136AQ96C01 138 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 KREMEN1Q96MU8 473 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 PIDD1Q9HB75 910 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 TUFT1Q9NNX1 390 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.52□□□□□ -0.247e-7■■■■■ 97.2
CTCFL-204ENST00000422869 WRAP73Q9P2S5 460 aaPredicted RBP13.52□□□□□ -0.24
CTCFL-204ENST00000422869 UVRAGQ9P2Y5 699 aa13.52□□□□□ -0.24
CTCFL-204ENST00000422869 EDF1O60869 148 aaKnown RBP13.52□□□□□ -0.25
CTCFL-204ENST00000422869 SMIM24O75264 130 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 GAS8O95995 478 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 GNAT1P11488 350 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 MUTP22033 750 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 RASA3Q14644 834 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 USH1GQ495M9 461 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 OTOP1Q7RTM1 612 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 SH3TC2Q8TF17 1288 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 DNAJC9Q8WXX5 260 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 TLE6Q9H808 572 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 LRRC4BQ9NT99 713 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 NUMBLQ9Y6R0 609 aa13.52□□□□□ -0.25
CTCFL-204ENST00000422869 SIGLEC16A6NMB1 481 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 CHMP2AO43633 222 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 HOXA13P31271 388 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-204ENST00000422869 MAN1A1P33908 653 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 LMNB2Q03252 620 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 KLC1Q07866 573 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 CWF19L1Q69YN2 538 aaKnown RBP13.51□□□□□ -0.25
CTCFL-204ENST00000422869 AMIGO3Q86WK7 504 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 GRK7Q8WTQ7 553 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 VTI1AQ96AJ9 217 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 PCIF1Q9H4Z3 704 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 A0A1W2PRG0 241 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 PRPF4O43172 522 aaKnown RBP eCLIP13.51□□□□□ -0.25
CTCFL-204ENST00000422869 FGFR1P11362 822 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 VAMP7P51809 220 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 PDK4Q16654 411 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 TMEM154Q6P9G4 183 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 STXBP4Q6ZWJ1 553 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 SYCP3Q8IZU3 236 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 RBBP8NLQ8NC74 664 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-204ENST00000422869 ZSWIM2Q8NEG5 633 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 PLEKHO2Q8TD55 490 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 SLC5A5Q92911 643 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 MIPEPQ99797 713 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 PLVAPQ9BX97 442 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 ADAMTSL1Q8N6G6 1762 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 ATRNL1Q5VV63 1379 aa13.51□□□□□ -0.25
CTCFL-204ENST00000422869 SP100P23497 879 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-204ENST00000422869 RXRBP28702 533 aa13.5□□□□□ -0.25
CTCFL-204ENST00000422869 TAF1BQ53T94 588 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-204ENST00000422869 RIBC1Q8N443 379 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-204ENST00000422869 ATL2Q8NHH9 583 aa13.5□□□□□ -0.25
CTCFL-204ENST00000422869 TEKT4Q8WW24 435 aa13.5□□□□□ -0.25
CTCFL-204ENST00000422869 ZNF333Q96JL9 665 aa13.5□□□□□ -0.25
CTCFL-204ENST00000422869 CCDC77Q9BR77 488 aa13.5□□□□□ -0.25
CTCFL-204ENST00000422869 WDR18Q9BV38 432 aa13.5□□□□□ -0.25
CTCFL-204ENST00000422869 AMNQ9BXJ7 453 aa13.5□□□□□ -0.25
CTCFL-204ENST00000422869 CYLDQ9NQC7 956 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms