RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 ZNF707Q96C28 371 aaPredicted RBP23.35■■□□□ 1.33
PTPN4-202ENST00000420482 KCNK12Q9HB15 430 aa23.35■■□□□ 1.33
PTPN4-202ENST00000420482 FBXW11Q9UKB1 542 aa23.35■■□□□ 1.33
PTPN4-202ENST00000420482 ODF2LQ9ULJ1 636 aa23.35■■□□□ 1.33
PTPN4-202ENST00000420482 MTCL1Q9Y4B5 1905 aaKnown RBP23.34■■□□□ 1.33
PTPN4-202ENST00000420482 CLDN3O15551 220 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 FGFR3P22607 806 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 PROZP22891 400 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 MATR3P43243 847 aaKnown RBP eCLIP23.34■■□□□ 1.33
PTPN4-202ENST00000420482 NOLC1Q14978 699 aaKnown RBP eCLIP23.34■■□□□ 1.33
PTPN4-202ENST00000420482 XKR4Q5GH76 650 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 PPM1LQ5SGD2 360 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 ZPBP2Q6X784 338 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 ANKS3Q6ZW76 656 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 RTL10Q7L3V2 364 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 TAS1R3Q7RTX0 852 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 CEP120Q8N960 986 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 TMEM161BQ8NDZ6 487 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 BICD1Q96G01 975 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 CLSTN3Q9BQT9 956 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 CXCL16Q9H2A7 254 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 ANKFY1Q9P2R3 1169 aa23.34■■□□□ 1.33
PTPN4-202ENST00000420482 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.34■■□□□ 1.33
PTPN4-202ENST00000420482 ZFP37Q9Y6Q3 630 aaPredicted RBP23.34■■□□□ 1.33
PTPN4-202ENST00000420482 VPS37CA5D8V6 355 aaPredicted RBP23.33■■□□□ 1.33
PTPN4-202ENST00000420482 XYLBO75191 536 aa23.33■■□□□ 1.33
PTPN4-202ENST00000420482 HARSP12081 509 aaKnown RBP23.33■■□□□ 1.33
PTPN4-202ENST00000420482 KCNE1P15382 129 aa23.33■■□□□ 1.33
PTPN4-202ENST00000420482 HOXA9P31269 272 aa23.33■■□□□ 1.33
PTPN4-202ENST00000420482 RPL9P32969 192 aaKnown RBP23.33■■□□□ 1.33
PTPN4-202ENST00000420482 ABCD1P33897 745 aa23.33■■□□□ 1.33
PTPN4-202ENST00000420482 UVSSAQ2YD98 709 aa23.33■■□□□ 1.33
PTPN4-202ENST00000420482 ALKAL1Q6UXT8 129 aa23.33■■□□□ 1.33
PTPN4-202ENST00000420482 SNX27Q96L92 541 aa23.33■■□□□ 1.33
PTPN4-202ENST00000420482 EPS15L1Q9UBC2 864 aa23.33■■□□□ 1.33
PTPN4-202ENST00000420482 DUSP12Q9UNI6 340 aa23.33■■□□□ 1.33
PTPN4-202ENST00000420482 NUB1Q9Y5A7 615 aa23.33■■□□□ 1.33
PTPN4-202ENST00000420482 KRT18P05783 430 aaKnown RBP23.32■■□□□ 1.32
PTPN4-202ENST00000420482 C8AP07357 584 aa23.32■■□□□ 1.32
PTPN4-202ENST00000420482 MAPTP10636 758 aaKnown RBP23.32■■□□□ 1.32
PTPN4-202ENST00000420482 RAB33AQ14088 237 aa23.32■■□□□ 1.32
PTPN4-202ENST00000420482 KYAT1Q16773 422 aa23.32■■□□□ 1.32
PTPN4-202ENST00000420482 FEZF2Q8TBJ5 459 aa23.32■■□□□ 1.32
PTPN4-202ENST00000420482 GOLGA2P5Q9HBQ8 144 aa23.32■■□□□ 1.32
PTPN4-202ENST00000420482 CNTN3Q9P232 1028 aa23.32■■□□□ 1.32
PTPN4-202ENST00000420482 MTRRQ9UBK8 725 aa23.32■■□□□ 1.32
PTPN4-202ENST00000420482 FBXL21Q9UKT6 434 aa23.32■■□□□ 1.32
PTPN4-202ENST00000420482 BACE2Q9Y5Z0 518 aa23.32■■□□□ 1.32
PTPN4-202ENST00000420482 USP34Q70CQ2 3546 aa23.32■■□□□ 1.32
PTPN4-202ENST00000420482 PODXLO00592 558 aa23.31■■□□□ 1.32
PTPN4-202ENST00000420482 OR1D2P34982 312 aa23.31■■□□□ 1.32
PTPN4-202ENST00000420482 CUL4AQ13619 759 aa23.31■■□□□ 1.32
PTPN4-202ENST00000420482 GET4Q7L5D6 327 aaPredicted RBP23.31■■□□□ 1.32
PTPN4-202ENST00000420482 GPBP1Q86WP2 473 aa23.31■■□□□ 1.32
PTPN4-202ENST00000420482 MYH11P35749 1972 aa23.31■■□□□ 1.32
PTPN4-202ENST00000420482 FAM13AO94988 1023 aa23.3■■□□□ 1.32
PTPN4-202ENST00000420482 PDGFBP01127 241 aaPredicted RBP23.3■■□□□ 1.32
PTPN4-202ENST00000420482 FSHRP23945 695 aa23.3■■□□□ 1.32
PTPN4-202ENST00000420482 NCKAP1LP55160 1127 aa23.3■■□□□ 1.32
PTPN4-202ENST00000420482 DHX8Q14562 1220 aaKnown RBP23.3■■□□□ 1.32
PTPN4-202ENST00000420482 SF3A1Q15459 793 aaKnown RBP23.3■■□□□ 1.32
PTPN4-202ENST00000420482 ASTLQ6HA08 431 aaPredicted RBP23.3■■□□□ 1.32
PTPN4-202ENST00000420482 HAUS6Q7Z4H7 955 aa23.3■■□□□ 1.32
PTPN4-202ENST00000420482 PLEKHA5Q9HAU0 1116 aa23.3■■□□□ 1.32
PTPN4-202ENST00000420482 PARVGQ9HBI0 331 aa23.3■■□□□ 1.32
PTPN4-202ENST00000420482 POLIQ9UNA4 740 aa23.3■■□□□ 1.32
PTPN4-202ENST00000420482 CDY1Q9Y6F8 540 aa23.3■■□□□ 1.32
PTPN4-202ENST00000420482 H7C4K7 107 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 ABLIM1O14639 778 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 SYN3O14994 580 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 N4BP1O75113 896 aaKnown RBP23.29■■□□□ 1.32
PTPN4-202ENST00000420482 TBCAO75347 108 aaKnown RBP23.29■■□□□ 1.32
PTPN4-202ENST00000420482 LAMP2P13473 410 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 TKTP29401 623 aaKnown RBP23.29■■□□□ 1.32
PTPN4-202ENST00000420482 LIG4P49917 911 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 CLCN5P51795 746 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 MCL1Q07820 350 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 AXDND1Q5T1B0 1012 aaPredicted RBP23.29■■□□□ 1.32
PTPN4-202ENST00000420482 MYCT1Q8N699 235 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 SLC7A14Q8TBB6 771 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 ZBTB45Q96K62 511 aaPredicted RBP23.29■■□□□ 1.32
PTPN4-202ENST00000420482 MYADMQ96S97 322 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 REEP2Q9BRK0 252 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 SMOC2Q9H3U7 446 aa23.29■■□□□ 1.32
PTPN4-202ENST00000420482 HNRNPDLO14979 420 aaKnown RBP23.28■■□□□ 1.32
PTPN4-202ENST00000420482 XPOTO43592 962 aaKnown RBP23.28■■□□□ 1.32
PTPN4-202ENST00000420482 POU2F2P09086 479 aa23.28■■□□□ 1.32
PTPN4-202ENST00000420482 CLTAP09496 248 aa23.28■■□□□ 1.32
PTPN4-202ENST00000420482 ELF1P32519 619 aa23.28■■□□□ 1.32
PTPN4-202ENST00000420482 BRCC3P46736 316 aa23.28■■□□□ 1.32
PTPN4-202ENST00000420482 CACNB1Q02641 598 aaPredicted RBP23.28■■□□□ 1.32
PTPN4-202ENST00000420482 SOX4Q06945 474 aaPredicted RBP23.28■■□□□ 1.32
PTPN4-202ENST00000420482 ARSHQ5FYA8 562 aa23.28■■□□□ 1.32
PTPN4-202ENST00000420482 GRASPQ7Z6J2 395 aaPredicted RBP23.28■■□□□ 1.32
PTPN4-202ENST00000420482 C3orf58Q8NDZ4 430 aa23.28■■□□□ 1.32
PTPN4-202ENST00000420482 KCNN1Q92952 543 aa23.28■■□□□ 1.32
PTPN4-202ENST00000420482 ZMAT2Q96NC0 199 aaKnown RBP23.28■■□□□ 1.32
PTPN4-202ENST00000420482 CCDC39Q9UFE4 941 aa23.28■■□□□ 1.32
PTPN4-202ENST00000420482 NPHP3-ACAD11A0A0J9YXS1 232 aa23.27■■□□□ 1.32
PTPN4-202ENST00000420482 K7ENM7 598 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms