RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 PRPF38AQ8NAV1 312 aaKnown RBP4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 CAGE1Q8TC20 777 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 ASB10Q8WXI3 467 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 MTMR8Q96EF0 704 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 ADI1Q9BV57 179 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 ACE2Q9BYF1 805 aaPredicted RBP4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 FAM126AQ9BYI3 521 aaPredicted RBP4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 IFT122Q9HBG6 1241 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 KIAA1586Q9HCI6 787 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 CCM2LQ9NUG4 571 aaPredicted RBP4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 TESQ9UGI8 421 aaKnown RBP4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 RPTORQ8N122 1335 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 ZMYM3Q14202 1370 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 B5MCH6 92 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 GASTP01350 101 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 RBP3P10745 1247 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 KRTAP10-9P60411 292 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 ERVK-21P61565 698 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 CDK17Q00537 523 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 SRSF2Q01130 221 aaKnown RBP4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 APBA1Q02410 837 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 ZNF362Q5T0B9 420 aaPredicted RBP4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 SYDE2Q5VT97 1194 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 ZNF480Q8WV37 535 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 SNX33Q8WV41 574 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 VTA1Q9NP79 307 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 HOMER2Q9NSB8 354 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 MKS1Q9NXB0 559 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 SAP30BPQ9UHR5 308 aaKnown RBP4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 TLK1Q9UKI8 766 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 FRMD4BQ9Y2L6 1034 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 MAP3K2Q9Y2U5 619 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 SPEF1Q9Y4P9 236 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 GPR45Q9Y5Y3 372 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 SALL3Q9BXA9 1300 aa4.37□□□□□ -1.71
SDCBPP3-201ENST00000419629 TRIM75PA6NK02 468 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 TBKBP1A7MCY6 615 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 AKR1B10O60218 316 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 ITGAMP11215 1152 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 CTSSP25774 331 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 GPR3P46089 330 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 CDKN1CP49918 316 aaPredicted RBP4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 IGBP1P78318 339 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 SCAPQ12770 1279 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 RESTQ13127 1097 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 MPP3Q13368 585 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 FAM50AQ14320 339 aaKnown RBP4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 BMT2Q1RMZ1 405 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 SPDYE7PQ495Y7 208 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 PGM2L1Q6PCE3 622 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 KCNK18Q7Z418 384 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 SLC44A3Q8N4M1 653 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 SLC9A6Q92581 669 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 TFAP2CQ92754 450 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 NEU1Q99519 415 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 DUSP26Q9BV47 211 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 GREM2Q9H772 168 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 FPGT-TNNI3KV9GXZ4 949 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 MAST3O60307 1309 aa4.36□□□□□ -1.71
SDCBPP3-201ENST00000419629 SHTN1A0MZ66 631 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 FAM171A2A8MVW0 826 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 ITGB6P18564 788 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 ECHS1P30084 290 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 CRHR1P34998 444 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 MALLQ13021 153 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 ACAP2Q15057 778 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 ADRM1Q16186 407 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 ARMC6Q6NXE6 501 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 CMIPQ8IY22 773 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 RNF169Q8NCN4 708 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 GPR156Q8NFN8 814 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 RIN2Q8WYP3 895 aaPredicted RBP4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 PHACTR3Q96KR7 559 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 PRDM12Q9H4Q4 367 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 RBM12Q9NTZ6 932 aaKnown RBP4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 TRHDEQ9UKU6 1024 aa4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 USP15Q9Y4E8 981 aaPredicted RBP4.35□□□□□ -1.71
SDCBPP3-201ENST00000419629 KLHL33A6NCF5 533 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 TMEM127O75204 238 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 KATNA1O75449 491 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 ENDOD1O94919 500 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 FOSP01100 380 aaPredicted RBP4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 IGLV2-14P01704 120 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 CFIP05156 583 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 MYBL2P10244 700 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 OSMP13725 252 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 AGXTP21549 392 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 CCND1P24385 295 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 MTNR1BP49286 362 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 SLC16A1P53985 500 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 PER3P56645 1201 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 CCT2P78371 535 aaKnown RBP4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 KRT85P78386 507 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 NHLH1Q02575 133 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 FOXF2Q12947 444 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 MTMR1Q13613 665 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 PNMA8AQ86V59 439 aaPredicted RBP4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 C1orf162Q8NEQ5 155 aaPredicted RBP4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 ZFP28Q8NHY6 868 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms