RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 FAM213AQ9BRX8 229 aa7.44□□□□□ -1.22
CPS1-202ENST00000417946 EIF2AQ9BY44 585 aaKnown RBP7.44□□□□□ -1.22
CPS1-202ENST00000417946 GCOM2Q9BZD3 368 aaPredicted RBP7.44□□□□□ -1.22
CPS1-202ENST00000417946 GANQ9H2C0 597 aa7.44□□□□□ -1.22
CPS1-202ENST00000417946 KCNF1Q9H3M0 494 aa7.44□□□□□ -1.22
CPS1-202ENST00000417946 TMX1Q9H3N1 280 aa7.44□□□□□ -1.22
CPS1-202ENST00000417946 ERVK-5Q9HDB9 667 aa7.44□□□□□ -1.22
CPS1-202ENST00000417946 AAASQ9NRG9 546 aa7.44□□□□□ -1.22
CPS1-202ENST00000417946 MAGEC2Q9UBF1 373 aaPredicted RBP7.44□□□□□ -1.22
CPS1-202ENST00000417946 AGO2Q9UKV8 859 aaKnown RBP7.44□□□□□ -1.22
CPS1-202ENST00000417946 UMODL1Q5DID0 1318 aa7.44□□□□□ -1.22
CPS1-202ENST00000417946 COL4A6Q14031 1691 aa7.44□□□□□ -1.22
CPS1-202ENST00000417946 KIAA0391O15091 583 aaKnown RBP7.43□□□□□ -1.22
CPS1-202ENST00000417946 OGTO15294 1046 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 PMM2O15305 246 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 GPR37O15354 613 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 CBFA2T2O43439 604 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 CAND2O75155 1236 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 AFPP02771 609 aaKnown RBP7.43□□□□□ -1.22
CPS1-202ENST00000417946 GYPCP04921 128 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 HARSP12081 509 aaKnown RBP7.43□□□□□ -1.22
CPS1-202ENST00000417946 CKBP12277 381 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 THPOP40225 353 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 FMO5P49326 533 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 FXR1P51114 621 aaKnown RBP eCLIP7.43□□□□□ -1.22
CPS1-202ENST00000417946 SYCP1Q15431 976 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 ZNF568Q3ZCX4 644 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 EPC2Q52LR7 807 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 ZNF618Q5T7W0 954 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 C1orf53Q5VUE5 145 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 E4F1Q66K89 784 aaPredicted RBP7.43□□□□□ -1.22
CPS1-202ENST00000417946 SLFN12LQ6IEE8 588 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 INTS8Q75QN2 995 aaKnown RBP7.43□□□□□ -1.22
CPS1-202ENST00000417946 ANKRD33Q7Z3H0 272 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 TMEM139Q8IV31 216 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 EFCAB13Q8IY85 973 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 FAM160A2Q8N612 972 aaPredicted RBP7.43□□□□□ -1.22
CPS1-202ENST00000417946 SMG8Q8ND04 991 aaKnown RBP7.43□□□□□ -1.22
CPS1-202ENST00000417946 OR5B17Q8NGF7 314 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 OLIG1Q8TAK6 271 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 CXorf38Q8TB03 319 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 LINC01599Q8WXQ3 324 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 SEMA4DQ92854 862 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 POP1Q99575 1024 aaKnown RBP7.43□□□□□ -1.22
CPS1-202ENST00000417946 REPIN1Q9BWE0 567 aaKnown RBP7.43□□□□□ -1.22
CPS1-202ENST00000417946 TMEM117Q9H0C3 514 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 METTL14Q9HCE5 456 aaKnown RBP7.43□□□□□ -1.22
CPS1-202ENST00000417946 PDE11AQ9HCR9 933 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 GINS2Q9Y248 185 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 FRMD4BQ9Y2L6 1034 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.43□□□□□ -1.22
CPS1-202ENST00000417946 SCN1AP35498 2009 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 MICAL3Q7RTP6 2002 aa7.43□□□□□ -1.22
CPS1-202ENST00000417946 PTPRSQ13332 1948 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 GTPBP10A4D1E9 387 aaKnown RBP7.42□□□□□ -1.22
CPS1-202ENST00000417946 CLDN3O15551 220 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 NBNO60934 754 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 VNN1O95497 513 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 NPTXRO95502 500 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 STAG3L1P0CL83 205 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 CXCL8P10145 99 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 ACTN1P12814 892 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 ATF7P17544 494 aaPredicted RBP7.42□□□□□ -1.22
CPS1-202ENST00000417946 SLC9A1P19634 815 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 SFPQP23246 707 aaKnown RBP eCLIP7.42□□□□□ -1.22
CPS1-202ENST00000417946 PON1P27169 355 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 GRM5P41594 1212 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 GCLMP48507 274 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 VAMP7P51809 220 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 CDC42EP1Q00587 391 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 UBXN1Q04323 297 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 PPP2R3AQ06190 1150 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 PCBP1Q15365 356 aaKnown RBP eCLIP7.42□□□□□ -1.22
CPS1-202ENST00000417946 SLC10A6Q3KNW5 377 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 TRIM60Q495X7 471 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 DCAF17Q5H9S7 520 aaPredicted RBP7.42□□□□□ -1.22
CPS1-202ENST00000417946 LMBRD2Q68DH5 695 aaPredicted RBP7.42□□□□□ -1.22
CPS1-202ENST00000417946 SPECC1LQ69YQ0 1117 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 SLC27A1Q6PCB7 646 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 SLC39A5Q6ZMH5 540 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 CATSPER4Q7RTX7 472 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 CREBRFQ8IUR6 639 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 THNSL1Q8IYQ7 743 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 TC2NQ8N9U0 490 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 ANKRD20A12PQ8NF67 263 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 CACTINQ8WUQ7 758 aaKnown RBP7.42□□□□□ -1.22
CPS1-202ENST00000417946 BAP1Q92560 729 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 SCLT1Q96NL6 688 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 CGRRF1Q99675 332 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 CRACR2AQ9BSW2 395 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 NAA15Q9BXJ9 866 aaKnown RBP7.42□□□□□ -1.22
CPS1-202ENST00000417946 SEZ6LQ9BYH1 1024 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 WNT8AQ9H1J5 351 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 NXF3Q9H4D5 531 aaKnown RBP7.42□□□□□ -1.22
CPS1-202ENST00000417946 RBAKQ9NYW8 714 aaPredicted RBP7.42□□□□□ -1.22
CPS1-202ENST00000417946 TBX21Q9UL17 535 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 ST3GAL5Q9UNP4 418 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 COQ4Q9Y3A0 265 aa7.42□□□□□ -1.22
CPS1-202ENST00000417946 TTC3P53804 2025 aa7.41□□□□□ -1.22
CPS1-202ENST00000417946 TTC26A0AVF1 554 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms