RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FUT10Q6P4F1 479 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 RSPO2Q6UXX9 243 aaPredicted RBP19.83■□□□□ 0.77
VCP-202ENST00000417448 TPRG1Q6ZUI0 275 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 MTSS1LQ765P7 747 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 IGSF22Q8N9C0 903 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 ITFG1Q8TB96 612 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 ZSCAN16Q9H4T2 348 aaPredicted RBP19.83■□□□□ 0.77
VCP-202ENST00000417448 GMEB2Q9UKD1 530 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 IPPQ9Y573 584 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 COL4A3BPQ9Y5P4 624 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 F5P12259 2224 aa19.82■□□□□ 0.76
VCP-202ENST00000417448 PRPHP41219 470 aa19.82■□□□□ 0.76
VCP-202ENST00000417448 MTAPQ13126 283 aa19.82■□□□□ 0.76
VCP-202ENST00000417448 C4orf19Q8IY42 314 aa19.82■□□□□ 0.76
VCP-202ENST00000417448 NETO1Q8TDF5 533 aa19.82■□□□□ 0.76
VCP-202ENST00000417448 CEP170P1Q96L14 293 aa19.82■□□□□ 0.76
VCP-202ENST00000417448 MMTAG2Q9BU76 263 aaKnown RBP19.82■□□□□ 0.76
VCP-202ENST00000417448 EIF2AQ9BY44 585 aaKnown RBP19.82■□□□□ 0.76
VCP-202ENST00000417448 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.82■□□□□ 0.76
VCP-202ENST00000417448 FBXW11Q9UKB1 542 aa19.82■□□□□ 0.76
VCP-202ENST00000417448 HES2Q9Y543 173 aa19.82■□□□□ 0.76
VCP-202ENST00000417448 ZZEF1O43149 2961 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 VWA8A3KMH1 1905 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.81■□□□□ 0.76
VCP-202ENST00000417448 LAD1O00515 517 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 ITGA4P13612 1032 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 RPS9P46781 194 aaKnown RBP19.81■□□□□ 0.76
VCP-202ENST00000417448 USP41Q3LFD5 358 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 PRSS55Q6UWB4 352 aaPredicted RBP19.81■□□□□ 0.76
VCP-202ENST00000417448 SNX29Q8TEQ0 813 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 RABGGTAQ92696 567 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 CLIC6Q96NY7 704 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 POLR3CQ9BUI4 534 aaPredicted RBP19.81■□□□□ 0.76
VCP-202ENST00000417448 POLD4Q9HCU8 107 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 COL4A2P08572 1712 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 SPEGQ15772 3267 aa19.81■□□□□ 0.76
VCP-202ENST00000417448 SRGAP2CP0DJJ0 459 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 PFKPQ01813 784 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 PDIA5Q14554 519 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 RTP2Q5QGT7 225 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 SRGAP1Q7Z6B7 1085 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 GPR65Q8IYL9 337 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 ZNF687Q8N1G0 1237 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 GSTCDQ8NEC7 633 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 ERMNQ8TAM6 284 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 PRPF31Q8WWY3 499 aaKnown RBP19.8■□□□□ 0.76
VCP-202ENST00000417448 TUFT1Q9NNX1 390 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 UBN1Q9NPG3 1134 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 HEBP1Q9NRV9 189 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 CACNG4Q9UBN1 327 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 KIAA1024Q9UPX6 916 aa19.8■□□□□ 0.76
VCP-202ENST00000417448 CCL16O15467 120 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 DKC1O60832 514 aaKnown RBP eCLIP19.79■□□□□ 0.76
VCP-202ENST00000417448 RPA1P27694 616 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 POTEHQ6S545 545 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 USP49Q70CQ1 688 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 KCNK18Q7Z418 384 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 NPAS3Q8IXF0 933 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 TMEM143Q96AN5 459 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 COLEC11Q9BWP8 271 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 FAM126AQ9BYI3 521 aaPredicted RBP19.79■□□□□ 0.76
VCP-202ENST00000417448 PLA2G2FQ9BZM2 168 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 DDX19AQ9NUU7 478 aaKnown RBP19.79■□□□□ 0.76
VCP-202ENST00000417448 HCFC1R1Q9NWW0 138 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 ADAM28Q9UKQ2 775 aa19.79■□□□□ 0.76
VCP-202ENST00000417448 ZFYVE26Q68DK2 2539 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 MYH11P35749 1972 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 E9PMD0 336 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 LYPLA2O95372 231 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 C8AP07357 584 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 HNRNPA1P09651 372 aaKnown RBP eCLIP19.78■□□□□ 0.76
VCP-202ENST00000417448 DNM1Q05193 864 aaKnown RBP19.78■□□□□ 0.76
VCP-202ENST00000417448 ARL6IP4Q66PJ3 421 aaKnown RBP19.78■□□□□ 0.76
VCP-202ENST00000417448 LAIR1Q6GTX8 287 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 MAEAQ7L5Y9 396 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 OTUD6AQ7L8S5 288 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 CNNM3Q8NE01 707 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 PNMA5Q96PV4 448 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 NELL2Q99435 816 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 CLSTN3Q9BQT9 956 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 CSRNP2Q9H175 543 aa19.78■□□□□ 0.76
VCP-202ENST00000417448 FBXO2Q9UK22 296 aaPredicted RBP19.78■□□□□ 0.76
VCP-202ENST00000417448 TICRRQ7Z2Z1 1910 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 ADAM12O43184 909 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 GDF9O60383 454 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 TSPAN1O60635 241 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 ADCY1Q08828 1119 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 LAMTOR4Q0VGL1 99 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 COL9A2Q14055 689 aaPredicted RBP19.77■□□□□ 0.76
VCP-202ENST00000417448 SLC39A14Q15043 492 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 STK38Q15208 465 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 PPM1LQ5SGD2 360 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 KRT79Q5XKE5 535 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 ZNF852Q6ZMS4 543 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 ING5Q8WYH8 240 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 CPB2Q96IY4 423 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 ZNF396Q96N95 335 aaPredicted RBP19.77■□□□□ 0.76
VCP-202ENST00000417448 PAAF1Q9BRP4 392 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 APOL6Q9BWW8 343 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 RAB34Q9BZG1 259 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms