RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CHRNB2P17787 502 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 KRT15P19012 456 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 COMTP21964 271 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 CDK8P49336 464 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 USP46P62068 366 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 NFIAQ12857 509 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 AOC3Q16853 763 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 DGKHQ86XP1 1220 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 ATG4AQ8WYN0 398 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 MASTLQ96GX5 879 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 PLEKHG4BQ96PX9 1271 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 TUBGCP5Q96RT8 1024 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 CYTH2Q99418 400 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 EYA3Q99504 573 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 TMEM47Q9BQJ4 181 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 DHX36Q9H2U1 1008 aaKnown RBP15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 DNAJC12Q9UKB3 198 aa15.65■□□□□ 0.1
NCKIPSD-204ENST00000416649 PSMG1O95456 288 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 LYNP07948 512 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 IMPDH2P12268 514 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 SOX5P35711 763 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 RTP1P59025 263 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 OCRLQ01968 901 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 THOC5Q13769 683 aaKnown RBP15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 DBN1Q16643 649 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 SHROOM1Q2M3G4 852 aaPredicted RBP15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 RNF207Q6ZRF8 634 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 MYLK4Q86YV6 388 aaPredicted RBP15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 WDR60Q8WVS4 1066 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 GATA6Q92908 595 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 ZNF184Q99676 751 aaPredicted RBP15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 NENFQ9UMX5 172 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 SCAF8Q9UPN6 1271 aaKnown RBP15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 A0A0G2JND7 137 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 COQ9O75208 318 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 CDH16O75309 829 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 ALDH1B1P30837 517 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 ITGA8P53708 1063 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 RHBDL3P58872 404 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 TMEM119Q4V9L6 283 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 ZFPM1Q8IX07 1006 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 HIC2Q96JB3 615 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 ZSWIM1Q9BR11 485 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 SPATA16Q9BXB7 569 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 FAM192AQ9GZU8 254 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 GPCPD1Q9NPB8 672 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 ETNK2Q9NVF9 386 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 PHF24Q9UPV7 400 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 EXOC3O60645 756 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 BAG2O95816 211 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 FAM200BP0CF97 657 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 HSPA6P17066 643 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 CA4P22748 312 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 CTNNA2P26232 953 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 ADCY8P40145 1251 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 JAM2P57087 298 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 ZBTB16Q05516 673 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 PPP2R5CQ13362 524 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 FRMD5Q7Z6J6 570 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 LRRC47Q8N1G4 583 aaKnown RBP15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 NINJ2Q9NZG7 142 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 PCDHA12Q9UN75 941 aa15.64■□□□□ 0.09
NCKIPSD-204ENST00000416649 NCANO14594 1321 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 CLDN3O15551 220 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 OPHN1O60890 802 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 PSMC4P43686 418 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 MOGSQ13724 837 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 SPARCL1Q14515 664 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 SLC15A2Q16348 729 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 CYFIP1Q7L576 1253 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 FAM118BQ9BPY3 351 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 CCDC77Q9BR77 488 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 MEIS1O00470 390 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 FTLP02792 175 aaPredicted RBP15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 SGO2Q562F6 1265 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 OLFML2BQ68BL8 750 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 IZUMO2Q6UXV1 221 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 SDCCAG8Q86SQ7 713 aaPredicted RBP15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 SLC13A5Q86YT5 568 aaPredicted RBP15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 SLC30A5Q8TAD4 765 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 SLC35C1Q96A29 364 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 PCDHA2Q9Y5H9 948 aa15.63■□□□□ 0.09
NCKIPSD-204ENST00000416649 A6NJR5 290 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 SLC16A2P36021 539 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 CPA2P48052 419 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 SNAP25P60880 206 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 CLUL1Q15846 466 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 EDRF1Q3B7T1 1238 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 SBK1Q52WX2 424 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 LCA5Q86VQ0 697 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 SFR1Q86XK3 245 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 SLC20A1Q8WUM9 679 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 C10orf82Q8WW14 230 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 NMD3Q96D46 503 aaKnown RBP15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 CEP95Q96GE4 821 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 TTC1Q99614 292 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 SPZ1Q9BXG8 430 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 LNPEPQ9UIQ6 1025 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 ANAPC5Q9UJX4 755 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms