RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ANO5Q75V66 913 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 GET4Q7L5D6 327 aaPredicted RBP9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 FBXO18Q8NFZ0 1043 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 ETNPPLQ8TBG4 499 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 GPR152Q8TDT2 470 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 TNFRSF25Q93038 417 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 WNT2BQ93097 391 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 MARVELD3Q96A59 401 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 PGBD4Q96DM1 585 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 FAM193BQ96PV7 902 aaPredicted RBP9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 RPS6KC1Q96S38 1066 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 INO80BQ9C086 356 aaPredicted RBP9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 ARHGEF3Q9NR81 526 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 DLGAP2Q9P1A6 1054 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 FAN1Q9Y2M0 1017 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 COL4A3BPQ9Y5P4 624 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 CYP3A7-CYP3A51PA0A087WV96 503 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 POTEMA6NI47 508 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 EML1O00423 815 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 NEMFO60524 1076 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 LRRN2O75325 713 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 EFEMP2O95967 443 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 HSP90AA1P07900 732 aaKnown RBP9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 SPATA31D3P0C874 917 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 CYP3A7P24462 503 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 HOXA11P31270 313 aaPredicted RBP9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 MLH1P40692 756 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 OR1G1P47890 313 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 NPEPPSP55786 919 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 CDC42EP1Q00587 391 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 USP4Q13107 963 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 HTR4Q13639 388 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 PPP4R3AQ6IN85 833 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 POTEGQ6S5H5 508 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 SPATA31D4Q6ZUB0 917 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 DGLUCYQ7Z3D6 616 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 MRPL10Q7Z7H8 261 aaKnown RBP9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 NOSTRINQ8IVI9 506 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 COLGALT2Q8IYK4 626 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 SLC44A3Q8N4M1 653 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 SMG8Q8ND04 991 aaKnown RBP9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 STAMQ92783 540 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 TMEM143Q96AN5 459 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 B3GALT6Q96L58 329 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 MBOAT7Q96N66 472 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 EIF2AQ9BY44 585 aaKnown RBP9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 FOXQ1Q9C009 403 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 FOXP1Q9H334 677 aaPredicted RBP9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 WRAP73Q9P2S5 460 aaPredicted RBP9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 STK39Q9UEW8 545 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 NOL7Q9UMY1 257 aaKnown RBP9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 PCDHB11Q9Y5F2 797 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 WDR87Q6ZQQ6 2873 aa9.16□□□□□ -0.94
UPF3AP1-201ENST00000413731 VPS37CA5D8V6 355 aaPredicted RBP9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 SP9P0CG40 484 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 SRGAP2CP0DJJ0 459 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 GLULP15104 373 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 NCLP19338 710 aaKnown RBP9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 MCM7P33993 719 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 SCNN1GP51170 649 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 PSMC5P62195 406 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 DSG1Q02413 1049 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 DSC1Q08554 894 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 CALCRLQ16602 461 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 TTC38Q5R3I4 469 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 KIAA0319Q5VV43 1072 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 ZC3H14Q6PJT7 736 aaKnown RBP9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 SRGAP1Q7Z6B7 1085 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 BPHLQ86WA6 291 aaPredicted RBP9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 SLFN12Q8IYM2 578 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 DCLK2Q8N568 766 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 PSPC1Q8WXF1 523 aaKnown RBP9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 ZFP42Q96MM3 310 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 GAD1Q99259 594 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 RHOBTB2Q9BYZ6 727 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 SEMA4AQ9H3S1 761 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 RXFP1Q9HBX9 757 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 DCTN4Q9UJW0 460 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 VAV3Q9UKW4 847 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 HES2Q9Y543 173 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 IPPQ9Y573 584 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 NUMBLQ9Y6R0 609 aa9.15□□□□□ -0.94
UPF3AP1-201ENST00000413731 COL4A2P08572 1712 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 RALGAPA1Q6GYQ0 2036 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 ARL5CA6NH57 179 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 ANHXE9PGG2 379 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 TBX3O15119 743 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 TGM5O43548 720 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 TSPAN1O60635 241 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 ERLIN2O94905 339 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 PAPLNO95428 1278 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 BAG4O95429 457 aaKnown RBP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 ALDH2P05091 517 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 LAMP2P13473 410 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 ITGA4P13612 1032 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 RPL17P18621 184 aaKnown RBP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 PDCP20941 246 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 LSM11P83369 360 aaKnown RBP eCLIP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 LAMTOR4Q0VGL1 99 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 CUL4AQ13619 759 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms