RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 PCIF1Q9H4Z3 704 aa9.53□□□□□ -0.88
LINC02539-201ENST00000411615 RPF1Q9H9Y2 349 aaKnown RBP9.53□□□□□ -0.88
LINC02539-201ENST00000411615 DERAQ9Y315 318 aa9.53□□□□□ -0.88
LINC02539-201ENST00000411615 NFE2L3Q9Y4A8 694 aa9.53□□□□□ -0.88
LINC02539-201ENST00000411615 PCDHB7Q9Y5E2 793 aa9.53□□□□□ -0.88
LINC02539-201ENST00000411615 RALGAPA2Q2PPJ7 1873 aa9.53□□□□□ -0.88
LINC02539-201ENST00000411615 LRRC10BA6NIK2 292 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 BECN2A8MW95 431 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 AKAP3O75969 853 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 RECQL4O94761 1208 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 ACRP10323 421 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 KCNE1P15382 129 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 EEF1GP26641 437 aaKnown RBP9.52□□□□□ -0.89
LINC02539-201ENST00000411615 MAGEA10P43363 369 aaPredicted RBP9.52□□□□□ -0.89
LINC02539-201ENST00000411615 KCNJ6P48051 423 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 ACOT2P49753 483 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 AP3M2P53677 418 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 WDR5P61964 334 aaKnown RBP9.52□□□□□ -0.89
LINC02539-201ENST00000411615 PPP2R3AQ06190 1150 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 SPAG1Q07617 926 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 CYP24A1Q07973 514 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 PSMD6Q15008 389 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 ENOX2Q16206 610 aaKnown RBP9.52□□□□□ -0.89
LINC02539-201ENST00000411615 SLC10A6Q3KNW5 377 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 CDKAL1Q5VV42 579 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 CEP135Q66GS9 1140 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 AGMOQ6ZNB7 445 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 IRF2BP1Q8IU81 584 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 DHX40Q8IX18 779 aaKnown RBP9.52□□□□□ -0.89
LINC02539-201ENST00000411615 FAM186BQ8IYM0 893 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 CEP120Q8N960 986 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 SAAL1Q96ER3 474 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 SLC9A7Q96T83 725 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.52□□□□□ -0.89
LINC02539-201ENST00000411615 NXF3Q9H4D5 531 aaKnown RBP9.52□□□□□ -0.89
LINC02539-201ENST00000411615 CBX8Q9HC52 389 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 SNTG2Q9NY99 539 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 RBAKQ9NYW8 714 aaPredicted RBP9.52□□□□□ -0.89
LINC02539-201ENST00000411615 CNTN3Q9P232 1028 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 KANSL3Q9P2N6 904 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 ARMCX3Q9UH62 379 aaPredicted RBP9.52□□□□□ -0.89
LINC02539-201ENST00000411615 LRFN2Q9ULH4 789 aa9.52□□□□□ -0.89
LINC02539-201ENST00000411615 ANK1P16157 1881 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 CARNS1A5YM72 827 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 GOLGA8IPA6NC78 632 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 GOLGA8JA6NMD2 632 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 H0YGN5 161 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 PMM2O15305 246 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 STX10O60499 249 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 OFD1O75665 1012 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 HARSP12081 509 aaKnown RBP9.51□□□□□ -0.89
LINC02539-201ENST00000411615 KRT13P13646 458 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 ZNF18P17022 549 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 GTF2H1P32780 548 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 TNFSF9P41273 254 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 CASP4P49662 377 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 VAMP7P51809 220 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 TPM4P67936 248 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 MLLT1Q03111 559 aaPredicted RBP9.51□□□□□ -0.89
LINC02539-201ENST00000411615 ZBTB6Q15916 424 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 TJAP1Q5JTD0 557 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 ZBTB41Q5SVQ8 909 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 GLB1LQ6UWU2 654 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC02539-201ENST00000411615 OTOP2Q7RTS6 562 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 CBWD2Q8IUF1 395 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 TRIM59Q8IWR1 403 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 AOPEPQ8N6M6 819 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 PARD3BQ8TEW8 1205 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 SNX27Q96L92 541 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 TMEM117Q9H0C3 514 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 RSAD1Q9HA92 442 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 RNF19AQ9NV58 838 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 FANCLQ9NW38 375 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 MAGEC2Q9UBF1 373 aaPredicted RBP9.51□□□□□ -0.89
LINC02539-201ENST00000411615 PARP2Q9UGN5 583 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 C2CD2Q9Y426 696 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 HES2Q9Y543 173 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 SLC4A7Q9Y6M7 1214 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 TRIP11Q15643 1979 aa9.51□□□□□ -0.89
LINC02539-201ENST00000411615 PDCD11Q14690 1871 aaKnown RBP9.51□□□□□ -0.89
LINC02539-201ENST00000411615 ARL5CA6NH57 179 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 LACTBL1A8MY62 500 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 GOLGA6L19H0YKK7 550 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 XPOTO43592 962 aaKnown RBP9.5□□□□□ -0.89
LINC02539-201ENST00000411615 DGKIO75912 1065 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 CXCL8P10145 99 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 CYP3A5P20815 502 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 FECHP22830 423 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 AKAP5P24588 427 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 OSTNP61366 133 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 HTRA4P83105 476 aaPredicted RBP9.5□□□□□ -0.89
LINC02539-201ENST00000411615 KCNC4Q03721 635 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 BFSP1Q12934 665 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 CCDC40Q4G0X9 1142 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 SEZ6Q53EL9 994 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 TCP11X2Q5H9J9 407 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 WDR49Q8IV35 697 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 TMEM192Q8IY95 271 aa9.5□□□□□ -0.89
LINC02539-201ENST00000411615 RDH13Q8NBN7 331 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms