RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TBKBP1A7MCY6 615 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 C5orf67F2Z3F1 127 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 H3BNC9 293 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 IL18RAPO95256 599 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 FGFR1P11362 822 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 CASP4P49662 377 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 MARSP56192 900 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 OSTNP61366 133 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 ENPEPQ07075 957 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 SPAG1Q07617 926 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 SURF1Q15526 300 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 CRELD2Q6UXH1 353 aaPredicted RBP17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 FRMD5Q7Z6J6 570 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 LUZP1Q86V48 1076 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 CBWD2Q8IUF1 395 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 BRSK2Q8IWQ3 736 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 CD302Q8IX05 232 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 RNF169Q8NCN4 708 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 ANKRD20A12PQ8NF67 263 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 TMEM117Q9H0C3 514 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 PLEKHA5Q9HAU0 1116 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 SNTG2Q9NY99 539 aa17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 MRPL42Q9Y6G3 142 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-208ENST00000409531 CDK11BP21127 795 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 EEF1GP26641 437 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 CTNNB1P35222 781 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 TNFSF9P41273 254 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 PPP2R3AQ06190 1150 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 CYP24A1Q07973 514 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 GPM6BQ13491 265 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 SEZ6Q53EL9 994 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 CDKAL1Q5VV42 579 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 ABI1Q8IZP0 508 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 ZSWIM2Q8NEG5 633 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 GDPD5Q8WTR4 605 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 RSPH1Q8WYR4 309 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 CNOT6LQ96LI5 555 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 MFSD14AQ96MC6 490 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 TSPAN18Q96SJ8 248 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 APOL6Q9BWW8 343 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 PLVAPQ9BX97 442 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 SAMSN1Q9NSI8 373 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 RNF19AQ9NV58 838 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 PARP2Q9UGN5 583 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 ARMCX3Q9UH62 379 aaPredicted RBP17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 GIT1Q9Y2X7 761 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 HES2Q9Y543 173 aa17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 TDRD15B5MCY1 1934 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-208ENST00000409531 RECQL4O94761 1208 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 CXCL8P10145 99 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 ATF7P17544 494 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 PSMD6Q15008 389 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 CCDC85BQ15834 202 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 ENOX2Q16206 610 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 ZBTB41Q5SVQ8 909 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 CREBRFQ8IUR6 639 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 RNF214Q8ND24 703 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 TMC2Q8TDI7 906 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 PPM1EQ8WY54 764 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 CASD1Q96PB1 797 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 FNBP1Q96RU3 617 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 ASB7Q9H672 318 aa17.91■□□□□ 0.46
TSPAN4-208ENST00000409531 PRRC2BQ5JSZ5 2229 aaKnown RBP17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 KCNJ18B7U540 433 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 ADRB2P07550 413 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 TPM2P07951 284 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 AKAP5P24588 427 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 MTIF2P46199 727 aaKnown RBP17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 BFSP1Q12934 665 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 KCNJ12Q14500 433 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 TCP11X2Q5H9J9 407 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 GAS2L3Q86XJ1 694 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 IRF2BP1Q8IU81 584 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 FAM212AQ96EL1 285 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 C11orf84Q9BUA3 381 aaPredicted RBP17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 RSAD1Q9HA92 442 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 AAASQ9NRG9 546 aa17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.9■□□□□ 0.46
TSPAN4-208ENST00000409531 TRANK1O15050 2925 aa17.89■□□□□ 0.46
TSPAN4-208ENST00000409531 TTC26A0AVF1 554 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 STX10O60499 249 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 ZNF18P17022 549 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 VAMP7P51809 220 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 PTPROQ16827 1216 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 SLC10A6Q3KNW5 377 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 HSP90AA4PQ58FG1 418 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 CLLU1OSQ5K130 101 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 SPOUT1Q5T280 376 aaKnown RBP17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 GLB1LQ6UWU2 654 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 AGMOQ6ZNB7 445 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 NT5DC4Q86YG4 428 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 PARD3BQ8TEW8 1205 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 BORCS6Q96GS4 357 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 SNX27Q96L92 541 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 RPS6KC1Q96S38 1066 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 RNF39Q9H2S5 420 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 CNTN3Q9P232 1028 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 DERAQ9Y315 318 aa17.89■□□□□ 0.45
TSPAN4-208ENST00000409531 FNDC1Q4ZHG4 1894 aaPredicted RBP17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 LACTBL1A8MY62 500 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms