RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 INTS13Q9NVM9 706 aa11.71□□□□□ -0.53
PDE4D-206ENST00000405053 KLK14Q9P0G3 267 aa11.71□□□□□ -0.53
PDE4D-206ENST00000405053 CXXC1Q9P0U4 656 aaPredicted RBP11.71□□□□□ -0.53
PDE4D-206ENST00000405053 LRFN2Q9ULH4 789 aa11.71□□□□□ -0.53
PDE4D-206ENST00000405053 LAMA2P24043 3122 aaKnown RBP11.71□□□□□ -0.54
PDE4D-206ENST00000405053 H0YGN5 161 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 P4HA2O15460 535 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 DGKIO75912 1065 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 AFPP02771 609 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 C4BPAP04003 597 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 NFICP08651 508 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 TRIM49P0CI25 452 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 TRIM49CP0CI26 452 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 DLATP10515 647 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 FGFR1P11362 822 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 TNNI1P19237 187 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 AFF1P51825 1210 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 COPB1P53618 953 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 FANCCQ00597 558 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 PPP3CAQ08209 521 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 KCNH2Q12809 1159 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 GRIK3Q13003 919 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 TMEM132DQ14C87 1099 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 DUOXA2Q1HG44 320 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 ZACNQ401N2 412 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 VWA3BQ502W6 1294 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 NOMO2Q5JPE7 1267 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 SARM1Q6SZW1 724 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 HELQQ8TDG4 1101 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 CACTINQ8WUQ7 758 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 ZNF689Q96CS4 500 aaPredicted RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 RPS6KC1Q96S38 1066 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 SLC9A7Q96T83 725 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 POP1Q99575 1024 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 MTIF3Q9H2K0 278 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 NDST4Q9H3R1 872 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 TMEM8AQ9HCN3 771 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 SLC38A7Q9NVC3 462 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 MIOSQ9NXC5 875 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 KANSL3Q9P2N6 904 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 UBQLN1Q9UMX0 589 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 PLAGL2Q9UPG8 496 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 COL4A6Q14031 1691 aa11.7□□□□□ -0.54
PDE4D-206ENST00000405053 RANBP2P49792 3224 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 PDCD11Q14690 1871 aaKnown RBP11.7□□□□□ -0.54
PDE4D-206ENST00000405053 TRIP11Q15643 1979 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 GTPBP10A4D1E9 387 aaKnown RBP11.69□□□□□ -0.54
PDE4D-206ENST00000405053 ZBBXA8MT70 800 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 LGALS16A8MUM7 142 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 XPOTO43592 962 aaKnown RBP11.69□□□□□ -0.54
PDE4D-206ENST00000405053 N4BP1O75113 896 aaKnown RBP11.69□□□□□ -0.54
PDE4D-206ENST00000405053 GJB5O95377 273 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 THP07101 528 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 BMP8BP34820 402 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 FMO5P49326 533 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 SCNN1GP51170 649 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 HTRA4P83105 476 aaPredicted RBP11.69□□□□□ -0.54
PDE4D-206ENST00000405053 DSC1Q08554 894 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 DCAF17Q5H9S7 520 aaPredicted RBP11.69□□□□□ -0.54
PDE4D-206ENST00000405053 TCERG1LQ5VWI1 586 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 KRT39Q6A163 491 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 SV2AQ7L0J3 742 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 CREBRFQ8IUR6 639 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 OR5B17Q8NGF7 314 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 CXorf38Q8TB03 319 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 URGCPQ8TCY9 931 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 KIF12Q96FN5 646 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 ANKRD36BP1Q96IX9 119 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 MRPL9Q9BYD2 267 aaKnown RBP11.69□□□□□ -0.54
PDE4D-206ENST00000405053 MTMR12Q9C0I1 747 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
PDE4D-206ENST00000405053 TAB2Q9NYJ8 693 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 COQ4Q9Y3A0 265 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 SLC4A7Q9Y6M7 1214 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 PDE4DIPQ5VU43 2346 aa11.69□□□□□ -0.54
PDE4D-206ENST00000405053 PTPRSQ13332 1948 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 GOLGA6L3A6NEY3 463 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 UPP2O95045 317 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 SERPINC1P01008 464 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 TNNC2P02585 160 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 TPM2P07951 284 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 TMEM191BP0C7N4 346 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 IBSPP21815 317 aaPredicted RBP11.68□□□□□ -0.54
PDE4D-206ENST00000405053 LRPAP1P30533 357 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 GCLMP48507 274 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 MXI1P50539 228 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 TFAMQ00059 246 aaKnown RBP11.68□□□□□ -0.54
PDE4D-206ENST00000405053 SOX4Q06945 474 aaPredicted RBP11.68□□□□□ -0.54
PDE4D-206ENST00000405053 NR1I3Q14994 352 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 CBWD6Q4V339 395 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 CBWD3Q5JTY5 395 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 GLRA4Q5JXX5 417 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 CBWD5Q5RIA9 395 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 C9orf50Q5SZB4 431 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 TDRD10Q5VZ19 366 aaKnown RBP11.68□□□□□ -0.54
PDE4D-206ENST00000405053 LMBRD2Q68DH5 695 aaPredicted RBP11.68□□□□□ -0.54
PDE4D-206ENST00000405053 TRAPPC11Q7Z392 1133 aa11.68□□□□□ -0.54
PDE4D-206ENST00000405053 CMTR2Q8IYT2 770 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms