RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 GTPBP4Q9BZE4 634 aaKnown RBP18.01■□□□□ 0.47
CGREF1-205ENST00000404694 TSPY26PQ9H489 355 aa18.01■□□□□ 0.47
CGREF1-205ENST00000404694 ZHX3Q9H4I2 956 aa18.01■□□□□ 0.47
CGREF1-205ENST00000404694 ADAM28Q9UKQ2 775 aa18.01■□□□□ 0.47
CGREF1-205ENST00000404694 LILRB3O75022 631 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 URODP06132 367 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 HARSP12081 509 aaKnown RBP18■□□□□ 0.47
CGREF1-205ENST00000404694 SCP2P22307 547 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 YARSP54577 528 aaKnown RBP18■□□□□ 0.47
CGREF1-205ENST00000404694 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.47
CGREF1-205ENST00000404694 ANKRD54Q6NXT1 300 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 FUT10Q6P4F1 479 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 CNNM4Q6P4Q7 775 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 DYMQ7RTS9 669 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 DDX12PQ92771 950 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 CASP10Q92851 521 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 SMARCE1Q969G3 411 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 PPP1R10Q96QC0 940 aaKnown RBP18■□□□□ 0.47
CGREF1-205ENST00000404694 CD320Q9NPF0 282 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 MRPL17Q9NRX2 175 aaKnown RBP18■□□□□ 0.47
CGREF1-205ENST00000404694 TOPORSQ9NS56 1045 aaPredicted RBP18■□□□□ 0.47
CGREF1-205ENST00000404694 ANO10Q9NW15 660 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 PRKAG3Q9UGI9 489 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 TBX20Q9UMR3 447 aa18■□□□□ 0.47
CGREF1-205ENST00000404694 PDCD11Q14690 1871 aaKnown RBP18■□□□□ 0.47
CGREF1-205ENST00000404694 C2CD2LO14523 706 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 CLDN3O15551 220 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 KIF4AO95239 1232 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 GLUD2P49448 558 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 ZP2Q05996 745 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 TYRO3Q06418 890 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 MCL1Q07820 350 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 DPYDQ12882 1025 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 PNOCQ13519 176 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 STX1AQ16623 288 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 XKR4Q5GH76 650 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 SYCE2Q6PIF2 218 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 HASPINQ8TF76 798 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 BICD1Q96G01 975 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 SNX27Q96L92 541 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 C7orf25Q9BPX7 421 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 GPR62Q9BZJ7 368 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 HAPLN2Q9GZV7 340 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 RMND1Q9NWS8 449 aa17.99■□□□□ 0.47
CGREF1-205ENST00000404694 USP15Q9Y4E8 981 aaPredicted RBP17.99■□□□□ 0.47
CGREF1-205ENST00000404694 MYMKA6NI61 221 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 HNRNPDLO14979 420 aaKnown RBP17.98■□□□□ 0.47
CGREF1-205ENST00000404694 PIGRP01833 764 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 CNPP09543 421 aaKnown RBP17.98■□□□□ 0.47
CGREF1-205ENST00000404694 EPCAMP16422 314 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 HOXB8P17481 243 aaPredicted RBP17.98■□□□□ 0.47
CGREF1-205ENST00000404694 NMT1P30419 496 aaKnown RBP17.98■□□□□ 0.47
CGREF1-205ENST00000404694 AFMP43652 599 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 DSG1Q02413 1049 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 ALKAL1Q6UXT8 129 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 SFR1Q86XK3 245 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 ADHFE1Q8IWW8 467 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 GJD3Q8N144 294 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 CCDC47Q96A33 483 aaKnown RBP17.98■□□□□ 0.47
CGREF1-205ENST00000404694 DNAJC19Q96DA6 116 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 B3GALT6Q96L58 329 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 ACAP3Q96P50 834 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 KLHL5Q96PQ7 755 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 EMILIN2Q9BXX0 1053 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 S1PR5Q9H228 398 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 GRPEL1Q9HAV7 217 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 CHST7Q9NS84 486 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 SSX2IPQ9Y2D8 614 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 PCDHA5Q9Y5H7 936 aa17.98■□□□□ 0.47
CGREF1-205ENST00000404694 SMIM28A0A1B0GU29 152 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 MEFVO15553 781 aaPredicted RBP17.97■□□□□ 0.47
CGREF1-205ENST00000404694 TADA2AO75478 443 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 SF3B1O75533 1304 aaKnown RBP eCLIP17.97■□□□□ 0.47
CGREF1-205ENST00000404694 SSTR3P32745 418 aaPredicted RBP17.97■□□□□ 0.47
CGREF1-205ENST00000404694 ABCD1P33897 745 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 LIG4P49917 911 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 PLXNA3P51805 1871 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 NLRP12P59046 1061 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 GTF2BQ00403 316 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 USP41Q3LFD5 358 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 SEZ6Q53EL9 994 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 CT47A1Q5JQC4 288 aaPredicted RBP17.97■□□□□ 0.47
CGREF1-205ENST00000404694 KIAA0319Q5VV43 1072 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 PPFIBP1Q86W92 1011 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 GAS2L3Q86XJ1 694 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 MAP4K3Q8IVH8 894 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 SLC22A17Q8WUG5 538 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 SUSD6Q92537 303 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 APOL5Q9BWW9 433 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 GOLGA2P5Q9HBQ8 144 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 CNTN3Q9P232 1028 aa17.97■□□□□ 0.47
CGREF1-205ENST00000404694 VWA8A3KMH1 1905 aa17.96■□□□□ 0.47
CGREF1-205ENST00000404694 KLRC2P26717 231 aa17.96■□□□□ 0.47
CGREF1-205ENST00000404694 MATR3P43243 847 aaKnown RBP eCLIP17.96■□□□□ 0.47
CGREF1-205ENST00000404694 CLCN4P51793 760 aa17.96■□□□□ 0.47
CGREF1-205ENST00000404694 KCNB1Q14721 858 aa17.96■□□□□ 0.47
CGREF1-205ENST00000404694 ZC2HC1CQ53FD0 456 aaPredicted RBP17.96■□□□□ 0.47
CGREF1-205ENST00000404694 KIAA1841Q6NSI8 718 aa17.96■□□□□ 0.47
CGREF1-205ENST00000404694 ZMAT2Q96NC0 199 aaKnown RBP17.96■□□□□ 0.47
CGREF1-205ENST00000404694 POP1Q99575 1024 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms