RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 RESTQ13127 1097 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 DHX8Q14562 1220 aaKnown RBP14.68□□□□□ -0.06
VCX3A-202ENST00000398729 KARSQ15046 597 aaKnown RBP14.68□□□□□ -0.06
VCX3A-202ENST00000398729 ARSHQ5FYA8 562 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 PDXDC1Q6P996 788 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 ZPBP2Q6X784 338 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 CEP57Q86XR8 500 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 PALB2Q86YC2 1186 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 ZDHHC14Q8IZN3 488 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 PLCD3Q8N3E9 789 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 TDRD5Q8NAT2 981 aaKnown RBP14.68□□□□□ -0.06
VCX3A-202ENST00000398729 CMASQ8NFW8 434 aaPredicted RBP14.68□□□□□ -0.06
VCX3A-202ENST00000398729 HDAC7Q8WUI4 952 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 UROC1Q96N76 676 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 REEP2Q9BRK0 252 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 TTPALQ9BTX7 342 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 CCSER1Q9C0I3 900 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 PLEKHA4Q9H4M7 779 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 SLC38A7Q9NVC3 462 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 ANKFY1Q9P2R3 1169 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 USTQ9Y2C2 406 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 SMIM28A0A1B0GU29 152 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 CCDC195A0A1B0GUA6 201 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 TMEM189-UBE2V1I3L0A0 370 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 ABLIM1O14639 778 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 FAM13AO94988 1023 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 KRT18P05783 430 aaKnown RBP14.67□□□□□ -0.06
VCX3A-202ENST00000398729 HARSP12081 509 aaKnown RBP14.67□□□□□ -0.06
VCX3A-202ENST00000398729 SCP2P22307 547 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 MARCKSP29966 332 aaPredicted RBP14.67□□□□□ -0.06
VCX3A-202ENST00000398729 CLCN5P51795 746 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 CLCNKBP51801 687 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 NCKAP1LP55160 1127 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 MCM6Q14566 821 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 NOLC1Q14978 699 aaKnown RBP eCLIP14.67□□□□□ -0.06
VCX3A-202ENST00000398729 PTPAQ15257 358 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 PSMD5Q16401 504 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 XKR4Q5GH76 650 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 RTP2Q5QGT7 225 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 DCLRE1AQ6PJP8 1040 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 PRSS55Q6UWB4 352 aaPredicted RBP14.67□□□□□ -0.06
VCX3A-202ENST00000398729 ALKAL1Q6UXT8 129 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 CYP26C1Q6V0L0 522 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 CCDC149Q6ZUS6 474 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 GLYCTKQ8IVS8 523 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 PIK3R5Q8WYR1 880 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 RAD54LQ92698 747 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 BICD1Q96G01 975 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 ZBTB45Q96K62 511 aaPredicted RBP14.67□□□□□ -0.06
VCX3A-202ENST00000398729 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 BLOC1S4Q9NUP1 217 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 NCOR2Q9Y618 2525 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 DENND4AQ7Z401 1863 aa14.67□□□□□ -0.06
VCX3A-202ENST00000398729 MTCL1Q9Y4B5 1905 aaKnown RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 CEP250Q9BV73 2442 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 C2orf16Q68DN1 1984 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 CLDN3O15551 220 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 TGM5O43548 720 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 TRAPPC3O43617 180 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 SPATA31D3P0C874 917 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 MYBP10242 640 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 KCNE1P15382 129 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 RPL17P18621 184 aaKnown RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 DDIT3P35638 169 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 MATR3P43243 847 aaKnown RBP eCLIP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 UPP1Q16831 310 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 CWF19L1Q69YN2 538 aaKnown RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 SPATA31D4Q6ZUB0 917 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 OTOP3Q7RTS5 596 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 HAUS6Q7Z4H7 955 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 MYCT1Q8N699 235 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 LNX1Q8TBB1 728 aaPredicted RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 LRRC15Q8TF66 581 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 LARP4BQ92615 738 aaKnown RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 KCNN1Q92952 543 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 ACSF2Q96CM8 615 aaPredicted RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 DDX27Q96GQ7 796 aaKnown RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 RHOBTB2Q9BYZ6 727 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 ZSCAN16Q9H4T2 348 aaPredicted RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 PARVGQ9HBI0 331 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 GOLGA2P5Q9HBQ8 144 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 CCDC39Q9UFE4 941 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 FBXO2Q9UK22 296 aaPredicted RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 SRPRBQ9Y5M8 271 aaKnown RBP14.66□□□□□ -0.06
VCX3A-202ENST00000398729 CITO14578 2027 aa14.66□□□□□ -0.06
VCX3A-202ENST00000398729 K7ENM7 598 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 STX6O43752 255 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 TRAK2O60296 914 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 TBCAO75347 108 aaKnown RBP14.65□□□□□ -0.06
VCX3A-202ENST00000398729 RFPL2O75678 378 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 TXLNAP40222 546 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 LIG4P49917 911 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 ZNF131P52739 623 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 CEBPZQ03701 1054 aaKnown RBP14.65□□□□□ -0.06
VCX3A-202ENST00000398729 MCL1Q07820 350 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 SPECC1Q5M775 1068 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 FAM173BQ6P4H8 233 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 LILRA6Q6PI73 481 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 ADSSL1Q8N142 457 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms