RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 ZNF598Q86UK7 904 aaKnown RBP12.4□□□□□ -0.42
PPME1-202ENST00000398427 ECHDC2Q86YB7 292 aa12.4□□□□□ -0.42
PPME1-202ENST00000398427 LPPQ93052 612 aa12.4□□□□□ -0.42
PPME1-202ENST00000398427 MKNK1Q9BUB5 465 aa12.4□□□□□ -0.42
PPME1-202ENST00000398427 MED4Q9NPJ6 270 aa12.4□□□□□ -0.42
PPME1-202ENST00000398427 C1orf112Q9NSG2 853 aa12.4□□□□□ -0.42
PPME1-202ENST00000398427 FRMD4BQ9Y2L6 1034 aa12.4□□□□□ -0.42
PPME1-202ENST00000398427 PTPRSQ13332 1948 aa12.4□□□□□ -0.42
PPME1-202ENST00000398427 CCDC189A1A4V9 331 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 SLC16A3O15427 465 aaKnown RBP12.39□□□□□ -0.43
PPME1-202ENST00000398427 CAPN15O75808 1086 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 RECQL4O94761 1208 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 ZRANB2O95218 330 aaKnown RBP eCLIP12.39□□□□□ -0.43
PPME1-202ENST00000398427 CLTAP09496 248 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 ZNF18P17022 549 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 AKAP5P24588 427 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 FAM189BP81408 668 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 FAM43BQ6ZT52 329 aaPredicted RBP12.39□□□□□ -0.43
PPME1-202ENST00000398427 ZNF365Q70YC5 407 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 MRPL10Q7Z7H8 261 aaKnown RBP12.39□□□□□ -0.43
PPME1-202ENST00000398427 FAM186BQ8IYM0 893 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 BORCS6Q96GS4 357 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 CNOT6LQ96LI5 555 aaKnown RBP12.39□□□□□ -0.43
PPME1-202ENST00000398427 LBHD1Q9BQE6 289 aaPredicted RBP12.39□□□□□ -0.43
PPME1-202ENST00000398427 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.436e-8■■■■□ 20.8
PPME1-202ENST00000398427 CXCL16Q9H2A7 254 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 KIAA1586Q9HCI6 787 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 RBAKQ9NYW8 714 aaPredicted RBP12.39□□□□□ -0.43
PPME1-202ENST00000398427 LAMA3Q16787 3333 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 ABHD14A-ACY1A0A1B0GW23 586 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 EPB41P11171 864 aaKnown RBP12.39□□□□□ -0.43
PPME1-202ENST00000398427 MAGEA9P43362 315 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 RGS19P49795 217 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 SLC10A6Q3KNW5 377 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 TMEM240Q5SV17 173 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 AGMOQ6ZNB7 445 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 CCDC91Q7Z6B0 441 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 BRSK2Q8IWQ3 736 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 CRIPAKQ8N1N5 446 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 RNF169Q8NCN4 708 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 PLEKHO2Q8TD55 490 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 ACAP3Q96P50 834 aa12.39□□□□□ -0.43
PPME1-202ENST00000398427 PDCD11Q14690 1871 aaKnown RBP12.39□□□□□ -0.43
PPME1-202ENST00000398427 MAPK13O15264 365 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 SLU7O95391 586 aaKnown RBP12.38□□□□□ -0.43
PPME1-202ENST00000398427 FGFR1OPO95684 399 aaKnown RBP12.38□□□□□ -0.43
PPME1-202ENST00000398427 ATP1A3P13637 1013 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 MARSP56192 900 aaKnown RBP12.38□□□□□ -0.43
PPME1-202ENST00000398427 CYP24A1Q07973 514 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 KYAT1Q16773 422 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
PPME1-202ENST00000398427 MFSD14AQ96MC6 490 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 DEF6Q9H4E7 631 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 RPF1Q9H9Y2 349 aaKnown RBP12.38□□□□□ -0.43
PPME1-202ENST00000398427 TTC26A0AVF1 554 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 BAIAP3O94812 1187 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 FGBP02675 491 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 SKIP12755 728 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 ITGA4P13612 1032 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 MAGEA10P43363 369 aaPredicted RBP12.38□□□□□ -0.43
PPME1-202ENST00000398427 WDR5P61964 334 aaKnown RBP12.38□□□□□ -0.43
PPME1-202ENST00000398427 DEFB103AP81534 67 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 CCDC40Q4G0X9 1142 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 PSRC1Q6PGN9 363 aaPredicted RBP12.38□□□□□ -0.43
PPME1-202ENST00000398427 NYAP1Q6ZVC0 841 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 SNX27Q96L92 541 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 PDE11AQ9HCR9 933 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 TMEM161AQ9NX61 479 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 KLK14Q9P0G3 267 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 PARP2Q9UGN5 583 aa12.38□□□□□ -0.43
PPME1-202ENST00000398427 KCNJ18B7U540 433 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 GNA14O95837 355 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 EOMESO95936 686 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 ACTN1P12814 892 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 DLG4P78352 724 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 BFSP1Q12934 665 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 GPS2Q13227 327 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 KCNJ12Q14500 433 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 TCP11X2Q5H9J9 407 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 FRMD5Q7Z6J6 570 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 REXO1L1PQ8IX06 675 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 HACE1Q8IYU2 909 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 CCDC127Q96BQ5 260 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 FAM84AQ96KN4 292 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 ZFP42Q96MM3 310 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 ELAC1Q9H777 363 aaKnown RBP12.37□□□□□ -0.43
PPME1-202ENST00000398427 RNF19AQ9NV58 838 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 ARMCX3Q9UH62 379 aaPredicted RBP12.37□□□□□ -0.43
PPME1-202ENST00000398427 LACTBL1A8MY62 500 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 MLH1P40692 756 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 AFF1P51825 1210 aaKnown RBP12.37□□□□□ -0.43
PPME1-202ENST00000398427 YARSP54577 528 aaKnown RBP12.37□□□□□ -0.43
PPME1-202ENST00000398427 POU5F1Q01860 360 aaKnown RBP12.37□□□□□ -0.43
PPME1-202ENST00000398427 PSMD6Q15008 389 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 C1orf220Q5T0J3 134 aa12.37□□□□□ -0.43
PPME1-202ENST00000398427 ALKAL1Q6UXT8 129 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms