RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 RNPC3Q96LT9 517 aaKnown RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 CASS4Q9NQ75 786 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 ADA2Q9NZK5 511 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 ARL2BPQ9Y2Y0 163 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 TRPM1Q7Z4N2 1603 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 C16orf96A6NNT2 1141 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 DFFAO00273 331 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 MAFGO15525 162 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 RHOBTB3O94955 611 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 SYF2O95926 243 aaKnown RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 HIST1H2AGP0C0S8 130 aaPredicted RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 SRGNP10124 158 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 HIST1H2ADP20671 130 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 EXOSC10Q01780 885 aaKnown RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 HIC1Q14526 733 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 NCAPHQ15003 741 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 RABL6Q3YEC7 729 aaPredicted RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 SYTL3Q4VX76 610 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 ZC3H12BQ5HYM0 836 aaKnown RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 SPATA21Q7Z572 469 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 DDIASQ8IXT1 998 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 PDCD6IPQ8WUM4 868 aaKnown RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 ARHGEF26Q96DR7 871 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 SAAL1Q96ER3 474 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 SGSM3Q96HU1 749 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 HIST1H2AHQ96KK5 128 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 HIST1H2AJQ99878 128 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 H2AFJQ9BTM1 129 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 MKNK1Q9BUB5 465 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 ROPN1BQ9BZX4 212 aaPredicted RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 ROPN1Q9HAT0 212 aaPredicted RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 NDFIP2Q9NV92 336 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 ZFATQ9P243 1243 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 FBXL5Q9UKA1 691 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 CDV3Q9UKY7 258 aaKnown RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 ANGPT2O15123 496 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 MTSS1O43312 755 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 NCK2O43639 380 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 TDP2O95551 362 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 GH1P01241 217 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 ZNF157P51786 506 aaPredicted RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 GRIN1Q05586 938 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 SLC18A3Q16572 532 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 LRRC8BQ6P9F7 803 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 SHC4Q6S5L8 630 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 POTEAQ6S8J7 498 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 HHIPL2Q6UWX4 724 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 GLYCTKQ8IVS8 523 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 COG1Q8WTW3 980 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 FAM161BQ96MY7 647 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 PSMC3IPQ9P2W1 217 aaPredicted RBP6.57□□□□□ -1.36
PGBD4-201ENST00000397766 POLIQ9UNA4 740 aa6.57□□□□□ -1.36
PGBD4-201ENST00000397766 NMT2O60551 498 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SLC25A27O95847 323 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 LLGL1Q15334 1064 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SV2CQ496J9 727 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 STRIP1Q5VSL9 837 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 AGGF1Q8N302 714 aaeCLIP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 ZNF555Q8NEP9 628 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 CELF1Q92879 486 aaKnown RBP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 C18orf8Q96DM3 657 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 PARK7Q99497 189 aaKnown RBP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 DDX47Q9H0S4 455 aaKnown RBP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 PIDD1Q9HB75 910 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 PRPF4O43172 522 aaKnown RBP eCLIP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SRP72O76094 671 aaKnown RBP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 ALDH1A1P00352 501 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 KITP10721 976 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 FBXW4P57775 412 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 ACTR2P61160 394 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 DPYDQ12882 1025 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 ZNF211Q13398 564 aaPredicted RBP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 ADSSL1Q8N142 457 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 ATPAF2Q8N5M1 289 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 OR6J1Q8NGC5 347 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 FAM84BQ96KN1 310 aaPredicted RBP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 TRABDQ9H4I3 376 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SMYD3Q9H7B4 428 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 PRDM5Q9NQX1 630 aaPredicted RBP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SELENONQ9NZV5 590 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 MAD2L2Q9UI95 211 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SNX12Q9UMY4 172 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 DNAJC6O75061 913 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 MAP4P27816 1152 aaKnown RBP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 COG2Q14746 738 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 LRRC8EQ6NSJ5 796 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 PID1Q7Z2X4 250 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SZRD1Q7Z422 152 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SETD3Q86TU7 594 aaPredicted RBP6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SAMD3Q8N6K7 520 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SCFD2Q8WU76 684 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 KIF28PB7ZC32 967 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 CACNB3P54284 484 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 CUL3Q13618 768 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 TMEM132DQ14C87 1099 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 ANKRD40Q6AI12 368 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 RRM2BQ7LG56 351 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 SLC16A10Q8TF71 515 aa6.56□□□□□ -1.36
PGBD4-201ENST00000397766 ARHGEF1Q92888 912 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms