RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 LMBRD2Q68DH5 695 aaPredicted RBP21.05■□□□□ 0.96
PDLIM2-205ENST00000397761 CYP26C1Q6V0L0 522 aa21.05■□□□□ 0.96
PDLIM2-205ENST00000397761 CAGE1Q8TC20 777 aa21.05■□□□□ 0.96
PDLIM2-205ENST00000397761 CCDC94Q9BW85 323 aaPredicted RBP21.05■□□□□ 0.96
PDLIM2-205ENST00000397761 AIPL1Q9NZN9 384 aa21.05■□□□□ 0.96
PDLIM2-205ENST00000397761 LACTBL1A8MY62 500 aa21.04■□□□□ 0.96
PDLIM2-205ENST00000397761 HLA-DRAP01903 254 aa21.04■□□□□ 0.96
PDLIM2-205ENST00000397761 COL6A1P12109 1028 aa21.04■□□□□ 0.96
PDLIM2-205ENST00000397761 TSR1Q2NL82 804 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-205ENST00000397761 NT5DC4Q86YG4 428 aa21.04■□□□□ 0.96
PDLIM2-205ENST00000397761 FAM84AQ96KN4 292 aa21.04■□□□□ 0.96
PDLIM2-205ENST00000397761 TRAIPQ9BWF2 469 aa21.04■□□□□ 0.96
PDLIM2-205ENST00000397761 STK33Q9BYT3 514 aa21.04■□□□□ 0.96
PDLIM2-205ENST00000397761 KCND1Q9NSA2 647 aa21.04■□□□□ 0.96
PDLIM2-205ENST00000397761 C2CD2Q9Y426 696 aa21.04■□□□□ 0.96
PDLIM2-205ENST00000397761 C1orf53Q5VUE5 145 aa21.03■□□□□ 0.96
PDLIM2-205ENST00000397761 GJB7Q6PEY0 223 aa21.03■□□□□ 0.96
PDLIM2-205ENST00000397761 ALKAL1Q6UXT8 129 aa21.03■□□□□ 0.96
PDLIM2-205ENST00000397761 TRAPPC11Q7Z392 1133 aa21.03■□□□□ 0.96
PDLIM2-205ENST00000397761 ANKLE1Q8NAG6 615 aa21.03■□□□□ 0.96
PDLIM2-205ENST00000397761 OSBPL7Q9BZF2 842 aa21.03■□□□□ 0.96
PDLIM2-205ENST00000397761 ZNHIT6Q9NWK9 470 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-205ENST00000397761 DNAJC12Q9UKB3 198 aa21.03■□□□□ 0.96
PDLIM2-205ENST00000397761 DERAQ9Y315 318 aa21.03■□□□□ 0.96
PDLIM2-205ENST00000397761 SCN1AP35498 2009 aa21.03■□□□□ 0.96
PDLIM2-205ENST00000397761 GJA8P48165 433 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 DSC3Q14574 896 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 XKR4Q5GH76 650 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 SFMBT2Q5VUG0 894 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 HGSNATQ68CP4 663 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 ANKRD33Q7Z3H0 272 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 ARHGEF19Q8IW93 802 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 SMG8Q8ND04 991 aaKnown RBP21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 HELQQ8TDG4 1101 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 SNX27Q96L92 541 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 CHP1Q99653 195 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 MTMR12Q9C0I1 747 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 GPR88Q9GZN0 384 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 NXF3Q9H4D5 531 aaKnown RBP21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 PADI3Q9ULW8 664 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 SCN5AQ14524 2016 aa21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 TDRD15B5MCY1 1934 aaKnown RBP21.02■□□□□ 0.96
PDLIM2-205ENST00000397761 TET1Q8NFU7 2136 aa21.02■□□□□ 0.95
PDLIM2-205ENST00000397761 SOWAHDA6NJG2 315 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 F8VZ95 297 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 NFICP08651 508 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 CAPN2P17655 700 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 BIRC3Q13489 604 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 MBTPS1Q14703 1052 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 JADE1Q6IE81 842 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 RAD9BQ6WBX8 426 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 CXorf38Q8TB03 319 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 FAM212AQ96EL1 285 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 FAM81BQ96LP2 452 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 NT5C1BQ96P26 610 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 SPAG5Q96R06 1193 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 TSPAN18Q96SJ8 248 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 TRIM6Q9C030 488 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 SNTG2Q9NY99 539 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 PITPNM1O00562 1244 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 TFRCP02786 760 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 GHRP10912 638 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 MSNP26038 577 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 CD52P31358 61 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 PRKCIP41743 596 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 PIK3CAP42336 1068 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 TFAMQ00059 246 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 GCNT1Q02742 428 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 PAK2Q13177 524 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 NCOA4Q13772 614 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 DRAP1Q14919 205 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 SMYD5Q6GMV2 418 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 TWF2Q6IBS0 349 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 SLC39A5Q6ZMH5 540 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 FMNL3Q8IVF7 1028 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 ANKRD36BP1Q96IX9 119 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 TOX2Q96NM4 488 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 UBE2TQ9NPD8 197 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 CNTN3Q9P232 1028 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 ARHGAP20Q9P2F6 1191 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 IPPQ9Y573 584 aa21.01■□□□□ 0.95
PDLIM2-205ENST00000397761 ZNF500O60304 480 aaPredicted RBP21■□□□□ 0.95
PDLIM2-205ENST00000397761 RECQL4O94761 1208 aa21■□□□□ 0.95
PDLIM2-205ENST00000397761 ASS1P00966 412 aaKnown RBP21■□□□□ 0.95
PDLIM2-205ENST00000397761 TNNC2P02585 160 aa21■□□□□ 0.95
PDLIM2-205ENST00000397761 TMEM191BP0C7N4 346 aa21■□□□□ 0.95
PDLIM2-205ENST00000397761 YARSP54577 528 aaKnown RBP21■□□□□ 0.95
PDLIM2-205ENST00000397761 NFX1Q12986 1120 aaKnown RBP21■□□□□ 0.95
PDLIM2-205ENST00000397761 MAPK8IP2Q13387 824 aaPredicted RBP21■□□□□ 0.95
PDLIM2-205ENST00000397761 BFSP2Q13515 415 aa21■□□□□ 0.95
PDLIM2-205ENST00000397761 RAPGEF1Q13905 1077 aa21■□□□□ 0.95
PDLIM2-205ENST00000397761 ZBTB6Q15916 424 aa21■□□□□ 0.95
PDLIM2-205ENST00000397761 FAM43BQ6ZT52 329 aaPredicted RBP21■□□□□ 0.95
PDLIM2-205ENST00000397761 ENOSF1Q7L5Y1 443 aa21■□□□□ 0.95
PDLIM2-205ENST00000397761 IRF2BP2Q7Z5L9 587 aa21■□□□□ 0.95
PDLIM2-205ENST00000397761 KREMEN1Q96MU8 473 aa21■□□□□ 0.95
PDLIM2-205ENST00000397761 HES2Q9Y543 173 aa21■□□□□ 0.95
PDLIM2-205ENST00000397761 SSU72P8A0A1W2PR75 194 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 ZNF623O75123 536 aa20.99■□□□□ 0.95
PDLIM2-205ENST00000397761 SERPING1P05155 500 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms