RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 HNRNPH3P31942 346 aaKnown RBP13.69□□□□□ -0.22
LMCD1-202ENST00000397386 ADKP55263 362 aaKnown RBP13.69□□□□□ -0.22
LMCD1-202ENST00000397386 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
LMCD1-202ENST00000397386 CACNA2D4Q7Z3S7 1137 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 FMNL3Q8IVF7 1028 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 TAS1R2Q8TE23 839 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 CPLX3Q8WVH0 158 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 SYN2Q92777 582 aaPredicted RBP13.69□□□□□ -0.22
LMCD1-202ENST00000397386 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 TMX1Q9H3N1 280 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 HIPK3Q9H422 1215 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 NXF3Q9H4D5 531 aaKnown RBP13.69□□□□□ -0.22
LMCD1-202ENST00000397386 ABHD10Q9NUJ1 306 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 SNTG2Q9NY99 539 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 CNTN3Q9P232 1028 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 PLAGL2Q9UPG8 496 aa13.69□□□□□ -0.22
LMCD1-202ENST00000397386 ANK1P16157 1881 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 CITO14578 2027 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 RNF225M0QZC1 329 aaPredicted RBP13.68□□□□□ -0.22
LMCD1-202ENST00000397386 TNNC2P02585 160 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 KCNE1P15382 129 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 POLR2FP61218 127 aaKnown RBP13.68□□□□□ -0.22
LMCD1-202ENST00000397386 TFAMQ00059 246 aaKnown RBP13.68□□□□□ -0.22
LMCD1-202ENST00000397386 BIRC3Q13489 604 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 TMEM132DQ14C87 1099 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 TSR1Q2NL82 804 aaKnown RBP13.68□□□□□ -0.22
LMCD1-202ENST00000397386 TRAPPC11Q7Z392 1133 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 EFCAB13Q8IY85 973 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 BAP1Q92560 729 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 APBB2Q92870 758 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 FAXDC2Q96IV6 333 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 OSBPL7Q9BZF2 842 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 RGS18Q9NS28 235 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 TBX21Q9UL17 535 aa13.68□□□□□ -0.22
LMCD1-202ENST00000397386 RALGAPA2Q2PPJ7 1873 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 RECQL4O94761 1208 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 VNN1O95497 513 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 HLA-DRAP01903 254 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 CLTBP09497 229 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 ACTN1P12814 892 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 CDK17Q00537 523 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 GCNT1Q02742 428 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 ZBTB6Q15916 424 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 PLEKHG4Q58EX7 1191 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 WDR44Q5JSH3 913 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 LMBRD2Q68DH5 695 aaPredicted RBP13.67□□□□□ -0.22
LMCD1-202ENST00000397386 JADE1Q6IE81 842 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 PHLDB3Q6NSJ2 640 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 ENOSF1Q7L5Y1 443 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 UBE2Q1Q7Z7E8 422 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 TAF4BQ92750 862 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 SEMA4DQ92854 862 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 JAKMIP2Q96AA8 810 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 NT5C1BQ96P26 610 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 ADAM2Q99965 735 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 STK33Q9BYT3 514 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 IMPG2Q9BZV3 1241 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 MTMR12Q9C0I1 747 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 UBN1Q9NPG3 1134 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 C1orf112Q9NSG2 853 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 GIT1Q9Y2X7 761 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 HES2Q9Y543 173 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 DNAH12Q6ZR08 3092 aa13.67□□□□□ -0.22
LMCD1-202ENST00000397386 BRCA2P51587 3418 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 XPOTO43592 962 aaKnown RBP13.66□□□□□ -0.22
LMCD1-202ENST00000397386 MGEA5O60502 916 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 NBNO60934 754 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 PHACTR2O75167 634 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 EOMESO95936 686 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 CXCL10P02778 98 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 NFICP08651 508 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 ITGA4P13612 1032 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 PIK3CAP42336 1068 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 NCOA4Q13772 614 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 GPNMBQ14956 572 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 MEA1Q16626 185 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 SGSM1Q2NKQ1 1148 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 SLC24A5Q71RS6 500 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 SEPT8Q92599 483 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 PGBD4Q96DM1 585 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 BAG1Q99933 345 aaPredicted RBP13.66□□□□□ -0.22
LMCD1-202ENST00000397386 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
LMCD1-202ENST00000397386 KCNF1Q9H3M0 494 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 ZNHIT6Q9NWK9 470 aaKnown RBP13.66□□□□□ -0.22
LMCD1-202ENST00000397386 PARP2Q9UGN5 583 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 ITGA11Q9UKX5 1188 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 UBQLN1Q9UMX0 589 aaKnown RBP13.66□□□□□ -0.22
LMCD1-202ENST00000397386 ATP11BQ9Y2G3 1177 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 FHOD1Q9Y613 1164 aa13.66□□□□□ -0.22
LMCD1-202ENST00000397386 TULP1O00294 542 aaPredicted RBP13.65□□□□□ -0.22
LMCD1-202ENST00000397386 ASS1P00966 412 aaKnown RBP13.65□□□□□ -0.22
LMCD1-202ENST00000397386 SKILP12757 684 aa13.65□□□□□ -0.22
LMCD1-202ENST00000397386 CYP3A5P20815 502 aa13.65□□□□□ -0.22
LMCD1-202ENST00000397386 AKAP5P24588 427 aa13.65□□□□□ -0.22
LMCD1-202ENST00000397386 ATICP31939 592 aa13.65□□□□□ -0.22
LMCD1-202ENST00000397386 RFC2P35250 354 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms