RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 DAXXQ9UER7 740 aaPredicted RBP20.65■□□□□ 0.9
MCF2L-207ENST00000397024 FBXW11Q9UKB1 542 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 HARSP12081 509 aaKnown RBP20.64■□□□□ 0.89
MCF2L-207ENST00000397024 TKTP29401 623 aaKnown RBP20.64■□□□□ 0.89
MCF2L-207ENST00000397024 GBP2P32456 591 aaPredicted RBP20.64■□□□□ 0.89
MCF2L-207ENST00000397024 YARSP54577 528 aaKnown RBP20.64■□□□□ 0.89
MCF2L-207ENST00000397024 ELAVL2Q12926 359 aaKnown RBP20.64■□□□□ 0.89
MCF2L-207ENST00000397024 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.64■□□□□ 0.89
MCF2L-207ENST00000397024 TMEM130Q8N3G9 435 aa20.64■□□□□ 0.89
MCF2L-207ENST00000397024 C18orf25Q96B23 403 aaPredicted RBP20.64■□□□□ 0.89
MCF2L-207ENST00000397024 SNX27Q96L92 541 aa20.64■□□□□ 0.89
MCF2L-207ENST00000397024 ACAP3Q96P50 834 aa20.64■□□□□ 0.89
MCF2L-207ENST00000397024 PHOX2BQ99453 314 aa20.64■□□□□ 0.89
MCF2L-207ENST00000397024 HAPLN2Q9GZV7 340 aa20.64■□□□□ 0.89
MCF2L-207ENST00000397024 PIDD1Q9HB75 910 aa20.64■□□□□ 0.89
MCF2L-207ENST00000397024 TOPORSQ9NS56 1045 aaPredicted RBP20.64■□□□□ 0.89
MCF2L-207ENST00000397024 BLOC1S4Q9NUP1 217 aa20.64■□□□□ 0.89
MCF2L-207ENST00000397024 KCNE1P15382 129 aa20.63■□□□□ 0.89
MCF2L-207ENST00000397024 OR1D2P34982 312 aa20.63■□□□□ 0.89
MCF2L-207ENST00000397024 TDGQ13569 410 aa20.63■□□□□ 0.89
MCF2L-207ENST00000397024 DHX8Q14562 1220 aaKnown RBP20.63■□□□□ 0.89
MCF2L-207ENST00000397024 SF3A1Q15459 793 aaKnown RBP20.63■□□□□ 0.89
MCF2L-207ENST00000397024 SLC10A6Q3KNW5 377 aa20.63■□□□□ 0.89
MCF2L-207ENST00000397024 AK8Q96MA6 479 aa20.63■□□□□ 0.89
MCF2L-207ENST00000397024 UROC1Q96N76 676 aa20.63■□□□□ 0.89
MCF2L-207ENST00000397024 CITO14578 2027 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 NARSO43776 548 aaKnown RBP20.62■□□□□ 0.89
MCF2L-207ENST00000397024 TOM1L1O75674 476 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 UBA7P41226 1012 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 SMTNP53814 917 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 NTHL1P78549 312 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 STRN3Q13033 797 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 RAB33AQ14088 237 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 KARSQ15046 597 aaKnown RBP20.62■□□□□ 0.89
MCF2L-207ENST00000397024 BRAPQ7Z569 592 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 GPBP1Q86WP2 473 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 ST13P5Q8NFI4 369 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-207ENST00000397024 STAMQ92783 540 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 REEP2Q9BRK0 252 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 KCND2Q9NZV8 630 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 CNTN3Q9P232 1028 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 ANKFY1Q9P2R3 1169 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 EPS15L1Q9UBC2 864 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 MTRRQ9UBK8 725 aa20.62■□□□□ 0.89
MCF2L-207ENST00000397024 PLCG1P19174 1290 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 NCKAP1LP55160 1127 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 MCM6Q14566 821 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 PDXDC1Q6P996 788 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 ZPBP2Q6X784 338 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 USP49Q70CQ1 688 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 GRASPQ7Z6J2 395 aaPredicted RBP20.61■□□□□ 0.89
MCF2L-207ENST00000397024 TMEM105Q8N8V8 129 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 CALML4Q96GE6 196 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 DDX27Q96GQ7 796 aaKnown RBP20.61■□□□□ 0.89
MCF2L-207ENST00000397024 IGSF9Q9P2J2 1179 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 CLIC4Q9Y696 253 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 USP34Q70CQ2 3546 aa20.61■□□□□ 0.89
MCF2L-207ENST00000397024 VPS37CA5D8V6 355 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-207ENST00000397024 PODXLO00592 558 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 CCL16O15467 120 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 SLC26A4O43511 780 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 C8AP07357 584 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 LAMP2P13473 410 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 MRE11P49959 708 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 PTPN5P54829 565 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 MCL1Q07820 350 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 NOLC1Q14978 699 aaKnown RBP eCLIP20.6■□□□□ 0.893e-6■■■■■ 34
MCF2L-207ENST00000397024 AXDND1Q5T1B0 1012 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-207ENST00000397024 HAUS6Q7Z4H7 955 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 SLC44A3Q8N4M1 653 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 SLC38A7Q9NVC3 462 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 LARSQ9P2J5 1176 aaKnown RBP20.6■□□□□ 0.89
MCF2L-207ENST00000397024 KCNG1Q9UIX4 513 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 DUSP12Q9UNI6 340 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 BACE2Q9Y5Z0 518 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 CDY1Q9Y6F8 540 aa20.6■□□□□ 0.89
MCF2L-207ENST00000397024 CLDN3O15551 220 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 TRAPPC3O43617 180 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 BMP15O95972 392 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 HNRNPA1P09651 372 aaKnown RBP eCLIP20.59■□□□□ 0.89
MCF2L-207ENST00000397024 NPR3P17342 541 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 LONP1P36776 959 aaKnown RBP20.59■□□□□ 0.89
MCF2L-207ENST00000397024 SPAG1Q07617 926 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 PTPAQ15257 358 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 SPECC1Q5M775 1068 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 PPM1LQ5SGD2 360 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 LIN9Q5TKA1 542 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 FAM173BQ6P4H8 233 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 GET4Q7L5D6 327 aaPredicted RBP20.59■□□□□ 0.89
MCF2L-207ENST00000397024 SLC7A14Q8TBB6 771 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 RAD54LQ92698 747 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 PRRX2Q99811 253 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.59■□□□□ 0.892e-6■■■□□ 18.4
MCF2L-207ENST00000397024 ODF2LQ9ULJ1 636 aa20.59■□□□□ 0.89
MCF2L-207ENST00000397024 NOTCH4Q99466 2003 aa20.58■□□□□ 0.89
MCF2L-207ENST00000397024 TBC1D4O60343 1298 aa20.58■□□□□ 0.89
MCF2L-207ENST00000397024 FSHRP23945 695 aa20.58■□□□□ 0.89
MCF2L-207ENST00000397024 ZNF131P52739 623 aa20.58■□□□□ 0.89
MCF2L-207ENST00000397024 ASTLQ6HA08 431 aaPredicted RBP20.58■□□□□ 0.89
MCF2L-207ENST00000397024 ANKS3Q6ZW76 656 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms