RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 CCDC66A2RUB6 948 aa18.47■□□□□ 0.55
SCNN1A-205ENST00000396966 DDX3XO00571 662 aaKnown RBP eCLIP18.47■□□□□ 0.55
SCNN1A-205ENST00000396966 DNA2P51530 1060 aa18.47■□□□□ 0.55
SCNN1A-205ENST00000396966 GRM1Q13255 1194 aa18.47■□□□□ 0.55
SCNN1A-205ENST00000396966 SURF1Q15526 300 aa18.47■□□□□ 0.55
SCNN1A-205ENST00000396966 LMBRD2Q68DH5 695 aaPredicted RBP18.47■□□□□ 0.55
SCNN1A-205ENST00000396966 PAXIP1Q6ZW49 1069 aaPredicted RBP18.47■□□□□ 0.55
SCNN1A-205ENST00000396966 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.47■□□□□ 0.55
SCNN1A-205ENST00000396966 C1orf112Q9NSG2 853 aa18.47■□□□□ 0.55
SCNN1A-205ENST00000396966 BTNL10A8MVZ5 291 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 ZEB2O60315 1214 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 PROZP22891 400 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 USP8P40818 1118 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 PIK3CAP42336 1068 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 LMAN1P49257 510 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 AP3M2P53677 418 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 ZNF568Q3ZCX4 644 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 CCDC70Q6NSX1 233 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 IFNLR1Q8IU57 520 aaPredicted RBP18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 SLC30A5Q8TAD4 765 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 HELQQ8TDG4 1101 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 U2AF1L4Q8WU68 220 aaKnown RBP18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 IFT122Q9HBG6 1241 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 INTUQ9ULD6 942 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 CNTNAP2Q9UHC6 1331 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 A0A087WZ62 844 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 H2AFZP0C0S5 128 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 FAM187BQ17R55 369 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 SEZ6Q53EL9 994 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 H2AFVQ71UI9 128 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 MMGT1Q8N4V1 131 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 LNX1Q8TBB1 728 aaPredicted RBP18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 KAT5Q92993 513 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 EXOC4Q96A65 974 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 MS4A14Q96JA4 679 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 KREMEN1Q96MU8 473 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 FDXACB1Q9BRP7 624 aaPredicted RBP18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 AP5M1Q9H0R1 490 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 ACBD3Q9H3P7 528 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 NENFQ9UMX5 172 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 TNFSF13BQ9Y275 285 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 Q9Y3F1 56 aa18.46■□□□□ 0.55
SCNN1A-205ENST00000396966 ABLIM1O14639 778 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 FAM189A1O60320 539 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 PALMO75781 387 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 HLA-DRAP01903 254 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 CPT1AP50416 773 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 WNT7BP56706 349 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 SLC7A5Q01650 507 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 TDRD10Q5VZ19 366 aaKnown RBP18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 GLYCTKQ8IVS8 523 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 FAM71AQ8IYT1 594 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 SHC3Q92529 594 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 AGPAT1Q99943 283 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 MINDY3Q9H8M7 445 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 PTPRHQ9HD43 1115 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 DMGDHQ9UI17 866 aaKnown RBP18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 ALDH1A1P00352 501 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 F2P00734 622 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 VTNP04004 478 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 TNFSF9P41273 254 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 GCNT1Q02742 428 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 IFI16Q16666 785 aaKnown RBP18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 MARCH8Q5T0T0 291 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 WDR49Q8IV35 697 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 NLRP7Q8WX94 980 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 SCLT1Q96NL6 688 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 SYT11Q9BT88 431 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 SEPT11Q9NVA2 429 aaKnown RBP18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 CPSF3Q9UKF6 684 aaKnown RBP18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 HPCAL4Q9UM19 191 aa18.45■□□□□ 0.54
SCNN1A-205ENST00000396966 PTPRJQ12913 1337 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 FTCDO95954 541 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 PAFAH1B1P43034 410 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 FCGRTP55899 365 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 ZNF572Q7Z3I7 529 aaPredicted RBP18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 FAM71BQ8TC56 605 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 TATDN2Q93075 761 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 PI4K2AQ9BTU6 479 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 SELENOOQ9BVL4 669 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 VIPAS39Q9H9C1 493 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 NRCAMQ92823 1304 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 A0A0U1RQG5 324 aaPredicted RBP18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 B4GALT5O43286 388 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 HNRNPH2P55795 449 aaKnown RBP18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 FAM212AQ96EL1 285 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 PPP1R16BQ96T49 567 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 SETD4Q9NVD3 440 aa18.44■□□□□ 0.54
SCNN1A-205ENST00000396966 KIF3CO14782 793 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 ITIH3Q06033 890 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 ZNF410Q86VK4 478 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 DNAAF5Q86Y56 855 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 THNSL1Q8IYQ7 743 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 ZIC5Q96T25 663 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 MED4Q9NPJ6 270 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 PACSIN2Q9UNF0 486 aaPredicted RBP18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 SMIM10L2AP0DMW4 78 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 SMIM10L2BP0DMW5 78 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 CDC42EP1Q00587 391 aa18.43■□□□□ 0.54
SCNN1A-205ENST00000396966 MFSD10Q14728 455 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms