RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ARMC4Q5T2S8 1044 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 GAS2L3Q86XJ1 694 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 NCKAP1LP55160 1127 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF235Q14590 738 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 MTERF2Q49AM1 385 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 MCRS1Q96EZ8 462 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 CCT8L2Q96SF2 557 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 FAM47DPA6NHR8 397 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 hCG_1984214I3L0E3 225 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 IGF2BP3O00425 579 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL4A4-201ENST00000396625 DGKIO75912 1065 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 IZUMO3Q5VZ72 239 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF713Q8N859 430 aaPredicted RBP10.84□□□□□ -0.67
COL4A4-201ENST00000396625 MYO3BQ8WXR4 1341 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.84□□□□□ -0.67
COL4A4-201ENST00000396625 STK25O00506 426 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 SDC4P31431 198 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 MMRN1Q13201 1228 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 IDI1Q13907 227 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 CCDC144BQ3MJ40 725 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 USP39Q53GS9 565 aaKnown RBP10.84□□□□□ -0.67
COL4A4-201ENST00000396625 SLC27A3Q5K4L6 730 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 CHSY1Q86X52 802 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 PROM2Q8N271 834 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 OLFM1Q99784 485 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 APPL1Q9UKG1 709 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 C12orf60Q5U649 245 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 DENND6AQ8IWF6 608 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 KIRREL3Q8IZU9 778 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 UXS1Q8NBZ7 420 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 GDAQ9Y2T3 454 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 SHROOM2Q13796 1616 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 YEATS2Q9ULM3 1422 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 NEURL1BA8MQ27 555 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 EIF3HO15372 352 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL4A4-201ENST00000396625 KLHL2O95198 593 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 RCN1Q15293 331 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 KIF2BQ8N4N8 673 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 VMP1Q96GC9 406 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 ABCC4O15439 1325 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 M0QYV0 167 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 TBXAS1P24557 533 aaPredicted RBP10.84□□□□□ -0.67
COL4A4-201ENST00000396625 ARMCX6Q7L4S7 300 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 C10orf53Q8N6V4 93 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 UBASH3BQ8TF42 649 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 SPATA16Q9BXB7 569 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 PSMC3IPQ9P2W1 217 aaPredicted RBP10.84□□□□□ -0.67
COL4A4-201ENST00000396625 STAP1Q9ULZ2 295 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 ADGRA3Q8IWK6 1321 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 P3H1Q32P28 736 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 STX12Q86Y82 276 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 SCN4BQ8IWT1 228 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 CABLES1Q8TDN4 633 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 LGALS16A8MUM7 142 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 NR3C1P04150 777 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 BCAMP50895 628 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 EFHBQ8N7U6 833 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 DDI1Q8WTU0 396 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 DCPSQ96C86 337 aaKnown RBP10.83□□□□□ -0.68
COL4A4-201ENST00000396625 BCL2L14Q9BZR8 327 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 PALD1Q9ULE6 856 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 KCNN4O15554 427 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 MAP3K13O43283 966 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 PEX1O43933 1283 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 VHLP40337 213 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 ERP27Q96DN0 273 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 ELMO2Q96JJ3 720 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 C6orf62Q9GZU0 229 aaPredicted RBP10.83□□□□□ -0.68
COL4A4-201ENST00000396625 DYRK4Q9NR20 520 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 K7ERI5 159 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 AP3B1O00203 1094 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 ACADSP16219 412 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 PSMC3P17980 439 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 PCMTD2Q9NV79 361 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 CD274Q9NZQ7 290 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 CDY2AQ9Y6F7 541 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 CDY1Q9Y6F8 540 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 TAF4O00268 1085 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 MAPKAPK2P49137 400 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 ZNF211Q13398 564 aaPredicted RBP10.83□□□□□ -0.68
COL4A4-201ENST00000396625 RESP18Q5W5W9 173 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 DGKHQ86XP1 1220 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 UNC45BQ8IWX7 931 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 RANBP17Q9H2T7 1088 aaKnown RBP10.83□□□□□ -0.68
COL4A4-201ENST00000396625 HERC5Q9UII4 1024 aaKnown RBP10.83□□□□□ -0.68
COL4A4-201ENST00000396625 NCK2O43639 380 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 PRKCQQ04759 706 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 CUL4AQ13619 759 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 ANKMY2Q8IV38 441 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 CLMNQ96JQ2 1002 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 RBBP8Q99708 897 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 MTO1Q9Y2Z2 717 aaKnown RBP10.83□□□□□ -0.68
COL4A4-201ENST00000396625 SAC3D1A6NKF1 404 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 PTPN12Q05209 780 aaKnown RBP10.83□□□□□ -0.68
COL4A4-201ENST00000396625 PDZK1Q5T2W1 519 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 ADCK2Q7Z695 626 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 DDX47Q9H0S4 455 aaKnown RBP10.83□□□□□ -0.68
COL4A4-201ENST00000396625 DNAJC12Q9UKB3 198 aa10.83□□□□□ -0.68
COL4A4-201ENST00000396625 PKP3Q9Y446 797 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms