RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 BTNL10A8MVZ5 291 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 FERP16591 822 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 EIF4BP23588 611 aaKnown RBP16.33■□□□□ 0.2
SCAF11-204ENST00000395454 GTF2H1P32780 548 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 MAGEA1P43355 309 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 CRYBB1P53674 252 aaPredicted RBP16.33■□□□□ 0.2
SCAF11-204ENST00000395454 DLG4P78352 724 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 PTK2Q05397 1052 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 MGAT3Q09327 533 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 NAA30Q147X3 362 aaPredicted RBP16.33■□□□□ 0.2
SCAF11-204ENST00000395454 CDCA2Q69YH5 1023 aaPredicted RBP16.33■□□□□ 0.2
SCAF11-204ENST00000395454 LRRC8DQ7L1W4 858 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 RSRC2Q7L4I2 434 aaKnown RBP16.33■□□□□ 0.2
SCAF11-204ENST00000395454 TRAPPC11Q7Z392 1133 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 RNF10Q8N5U6 811 aaKnown RBP16.33■□□□□ 0.2
SCAF11-204ENST00000395454 ZSWIM2Q8NEG5 633 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 TRIM58Q8NG06 486 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 OLIG1Q8TAK6 271 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 TMEM40Q8WWA1 233 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 SECISBP2LQ93073 1101 aaKnown RBP16.33■□□□□ 0.2
SCAF11-204ENST00000395454 SYT11Q9BT88 431 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 CARD6Q9BX69 1037 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 MINDY3Q9H8M7 445 aa16.33■□□□□ 0.2
SCAF11-204ENST00000395454 A0A087X0T9 212 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 K7ERI5 159 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 FAM228BP0C875 321 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 SELPP16109 830 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 EFNA5P52803 228 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 POU5F1BQ06416 359 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 WHAMMP3Q1A5X7 153 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 CBWD2Q8IUF1 395 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 NFKBIZQ9BYH8 718 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 TMEM134Q9H6X4 195 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 DUSP10Q9Y6W6 482 aa16.32■□□□□ 0.2
SCAF11-204ENST00000395454 HNRNPDLO14979 420 aaKnown RBP16.31■□□□□ 0.2
SCAF11-204ENST00000395454 DARSP14868 501 aaKnown RBP16.31■□□□□ 0.2
SCAF11-204ENST00000395454 CYP2C18P33260 490 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 SOX5P35711 763 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 STAT1P42224 750 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 CCL23P55773 120 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 CLDN10P78369 228 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 CETN1Q12798 172 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 MAPK6Q16659 721 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 ZNF571Q7Z3V5 609 aaPredicted RBP16.31■□□□□ 0.2
SCAF11-204ENST00000395454 C7orf61Q8IZ16 206 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 MNS1Q8NEH6 495 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 KIAA1586Q9HCI6 787 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 PRKAG2Q9UGJ0 569 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 EVI5O60447 810 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 IQCF3P0C7M6 154 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 GHRP10912 638 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 FGFR4P22455 802 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 MBTD1Q05BQ5 628 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 STRN3Q13033 797 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 HSP90AA2PQ14568 343 aaPredicted RBP16.31■□□□□ 0.2
SCAF11-204ENST00000395454 FAM26DQ5JW98 314 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 GJB7Q6PEY0 223 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 TRAF7Q6Q0C0 670 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 SRGAP1Q7Z6B7 1085 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 RDH13Q8NBN7 331 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 DPF3Q92784 378 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 SCLYQ96I15 445 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 TMEM117Q9H0C3 514 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 PCDH10Q9P2E7 1040 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 DNAJC12Q9UKB3 198 aa16.31■□□□□ 0.2
SCAF11-204ENST00000395454 TRIM43BA6NCK2 446 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 ERLIN2O94905 339 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 MXI1P50539 228 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 TUBB4BP68371 445 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 CYP24A1Q07973 514 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 BMS1Q14692 1282 aaKnown RBP16.3■□□□□ 0.2
SCAF11-204ENST00000395454 ELF2Q15723 593 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 PHLDB3Q6NSJ2 640 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 USP37Q86T82 979 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 IFNLR1Q8IU57 520 aaPredicted RBP16.3■□□□□ 0.2
SCAF11-204ENST00000395454 GPD1LQ8N335 351 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 CEP112Q8N8E3 955 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 TRIM43Q96BQ3 446 aaPredicted RBP16.3■□□□□ 0.2
SCAF11-204ENST00000395454 WNT8AQ9H1J5 351 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 CAPN6Q9Y6Q1 641 aa16.3■□□□□ 0.2
SCAF11-204ENST00000395454 RPS6KA5O75582 802 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 PRKCBP05771 671 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 RAG1P15918 1043 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 NFX1Q12986 1120 aaKnown RBP16.29■□□□□ 0.2
SCAF11-204ENST00000395454 DRAP1Q14919 205 aaPredicted RBP16.29■□□□□ 0.2
SCAF11-204ENST00000395454 NAB2Q15742 525 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 ERCC6LQ2NKX8 1250 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 FBXO47Q5MNV8 452 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 CATSPER4Q7RTX7 472 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 SLC30A5Q8TAD4 765 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 POMGNT1Q8WZA1 660 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 OSBPL7Q9BZF2 842 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 CCDC113Q9H0I3 377 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 TMEM8AQ9HCN3 771 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 ADAMTS1Q9UHI8 967 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 NAGPAQ9UK23 515 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 NOC2LQ9Y3T9 749 aaKnown RBP16.29■□□□□ 0.2
SCAF11-204ENST00000395454 JRKLQ9Y4A0 524 aa16.29■□□□□ 0.2
SCAF11-204ENST00000395454 RANBP2P49792 3224 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms