RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 PAPPA2Q9BXP8 1791 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 PTPRJQ12913 1337 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 LRRIQ4A6NIV6 560 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 ACO1P21399 889 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 STAT5BP51692 787 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 SEL1L2Q5TEA6 688 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 JAMLQ86YT9 394 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 GLG1Q92896 1179 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 SPOPO43791 374 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 ADCY3O60266 1144 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 PEX10O60683 326 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 PPFIA2O75334 1257 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 MAFO75444 373 aaPredicted RBP16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 CYP1A1P04798 512 aaPredicted RBP16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 MYBL1P10243 752 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 COPB2P35606 906 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 CEP85LQ5SZL2 805 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 FAM160B1Q5W0V3 765 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 SLC13A5Q86YT5 568 aaPredicted RBP16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 MCOLN2Q8IZK6 566 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 SH2D3CQ8N5H7 860 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 IPO4Q8TEX9 1081 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 SEPT1Q8WYJ6 367 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 BTBD6Q96KE9 485 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 TARS2Q9BW92 718 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 DPH5Q9H2P9 285 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 RBAKQ9NYW8 714 aaPredicted RBP16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 CNTN6Q9UQ52 1028 aa16.42■□□□□ 0.22
UBE2D3-207ENST00000394801 GRIN2DO15399 1336 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 CNTNAP2Q9UHC6 1331 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 PODXLO00592 558 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 RWDD2BP57060 319 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 LMBRD2Q68DH5 695 aaPredicted RBP16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 KCTD16Q68DU8 428 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 METTL7BQ6UX53 244 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 TRIM11Q96F44 468 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 FAM84AQ96KN4 292 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 FMO2Q99518 471 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 MSTO1Q9BUK6 570 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 RASAL2Q9UJF2 1139 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 CSADQ9Y600 493 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 IRF6O14896 467 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 EIF3HO15372 352 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 EDN1P05305 212 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 PIK3CAP42336 1068 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 CENPCQ03188 943 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 CAPSQ13938 189 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 FOXR1Q6PIV2 292 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 ZPBP2Q6X784 338 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 RUNDC3BQ96NL0 473 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 CGRRF1Q99675 332 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 EFCC1Q9HA90 598 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 LCMT1Q9UIC8 334 aa16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 RRP15Q9Y3B9 282 aaKnown RBP16.41■□□□□ 0.22
UBE2D3-207ENST00000394801 A0A0G2JLL6 359 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 GBP1P32455 592 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 DHX9Q08211 1270 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 CUL2Q13617 745 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 SIX1Q15475 284 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 PRRT2Q7Z6L0 340 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 CPNE8Q86YQ8 564 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 C12orf50Q8NA57 414 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 MAGOHBQ96A72 148 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 C18orf8Q96DM3 657 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 APOBEC3GQ9HC16 384 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 MTUS1Q9ULD2 1270 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 MYZAPP0CAP1 466 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 TCF7P36402 384 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 GNGT1P63211 74 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 ZNF844Q08AG5 666 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 BIRC3Q13489 604 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 ZBTB41Q5SVQ8 909 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 TTC27Q6P3X3 843 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 RUFY4Q6ZNE9 571 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 NCAPG2Q86XI2 1143 aa16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 ADARB2Q9NS39 739 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-207ENST00000394801 GOLGA6L10A6NI86 522 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 FSCN2O14926 492 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 NR1D1P20393 614 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 SLC1A1P43005 524 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 EFNA5P52803 228 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 SPOPLQ6IQ16 392 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 CCDC137Q6PK04 289 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 DLK2Q6UY11 383 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 TRIM72Q6ZMU5 477 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 C10orf67Q8IYJ2 551 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 VCPIP1Q96JH7 1222 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 FAM167AQ96KS9 214 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 PLVAPQ9BX97 442 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 TRIM31Q9BZY9 425 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 MROH7Q68CQ1 1323 aa16.39■□□□□ 0.21
UBE2D3-207ENST00000394801 CNMDO75829 334 aa16.38■□□□□ 0.21
UBE2D3-207ENST00000394801 ERLIN2O94905 339 aa16.38■□□□□ 0.21
UBE2D3-207ENST00000394801 CALCAP01258 141 aa16.38■□□□□ 0.21
UBE2D3-207ENST00000394801 TBXAS1P24557 533 aaPredicted RBP16.38■□□□□ 0.21
UBE2D3-207ENST00000394801 MAPK4P31152 587 aa16.38■□□□□ 0.21
UBE2D3-207ENST00000394801 FNTAP49354 379 aa16.38■□□□□ 0.21
UBE2D3-207ENST00000394801 AP3M2P53677 418 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms