RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CD302Q8IX05 232 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 HACE1Q8IYU2 909 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 LMO3Q8TAP4 145 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 CPLX3Q8WVH0 158 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 SEMA4DQ92854 862 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 FTHL17Q9BXU8 183 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 RNF19AQ9NV58 838 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 COQ4Q9Y3A0 265 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 TIMP1P01033 207 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 GYPCP04921 128 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 PTMAP06454 111 aaKnown RBP26.24■■□□□ 1.79
LRFN4-202ENST00000393952 TMEM191BP0C7N4 346 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 ATF7P17544 494 aaPredicted RBP26.24■■□□□ 1.79
LRFN4-202ENST00000393952 ITGB8P26012 769 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 TMEM132DQ14C87 1099 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 COL13A1Q5TAT6 717 aaPredicted RBP26.24■■□□□ 1.79
LRFN4-202ENST00000393952 TRIM65Q6PJ69 517 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 PPFIBP1Q86W92 1011 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 ECHDC2Q86YB7 292 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 EHBP1Q8NDI1 1231 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 FBXL13Q8NEE6 735 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 NEK11Q8NG66 645 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 KIF12Q96FN5 646 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 TSPYL2Q9H2G4 693 aaPredicted RBP26.24■■□□□ 1.79
LRFN4-202ENST00000393952 SIX2Q9NPC8 291 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 CNTN3Q9P232 1028 aa26.24■■□□□ 1.79
LRFN4-202ENST00000393952 C9IYK1 514 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 NOL4O94818 638 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 VNN1O95497 513 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 TNNC2P02585 160 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 TRIM21P19474 475 aaKnown RBP26.23■■□□□ 1.79
LRFN4-202ENST00000393952 GOLGA8FQ08AF8 430 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 GOLGA8DPQ0D2H9 430 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 SCARA3Q6AZY7 606 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 TRAPPC11Q7Z392 1133 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 CCDC186Q7Z3E2 898 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 TMEM130Q8N3G9 435 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 RNF169Q8NCN4 708 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 ANKRD36BP1Q96IX9 119 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 ZMAT2Q96NC0 199 aaKnown RBP26.23■■□□□ 1.79
LRFN4-202ENST00000393952 NUP58Q9BVL2 599 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 TTYH3Q9C0H2 523 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 C2CD2Q9Y426 696 aa26.23■■□□□ 1.79
LRFN4-202ENST00000393952 GOLGA6L6A8MZA4 724 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 RNF225M0QZC1 329 aaPredicted RBP26.22■■□□□ 1.79
LRFN4-202ENST00000393952 HLA-DRAP01903 254 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 SKIP12755 728 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 TRIM14Q14142 442 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 XKR4Q5GH76 650 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 GLRA4Q5JXX5 417 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 AGMOQ6ZNB7 445 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 APBB2Q92870 758 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 GANQ9H2C0 597 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 PLCB1Q9NQ66 1216 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.22■■□□□ 1.791e-10■■■■■ 493.8
LRFN4-202ENST00000393952 PCDH10Q9P2E7 1040 aa26.22■■□□□ 1.79
LRFN4-202ENST00000393952 MKI67P46013 3256 aaKnown RBP26.21■■□□□ 1.79
LRFN4-202ENST00000393952 PHACTR2O75167 634 aa26.21■■□□□ 1.79
LRFN4-202ENST00000393952 CASP14P31944 242 aa26.21■■□□□ 1.79
LRFN4-202ENST00000393952 FXR1P51114 621 aaKnown RBP eCLIP26.21■■□□□ 1.79
LRFN4-202ENST00000393952 ARID5BQ14865 1188 aa26.21■■□□□ 1.79
LRFN4-202ENST00000393952 FIGNQ5HY92 759 aa26.21■■□□□ 1.79
LRFN4-202ENST00000393952 KLHDC7AQ5VTJ3 777 aa26.21■■□□□ 1.79
LRFN4-202ENST00000393952 SLC24A5Q71RS6 500 aa26.21■■□□□ 1.79
LRFN4-202ENST00000393952 ZNF598Q86UK7 904 aaKnown RBP26.21■■□□□ 1.79
LRFN4-202ENST00000393952 CACTINQ8WUQ7 758 aaKnown RBP26.21■■□□□ 1.79
LRFN4-202ENST00000393952 VWCEQ96DN2 955 aa26.21■■□□□ 1.79
LRFN4-202ENST00000393952 ZFP42Q96MM3 310 aa26.21■■□□□ 1.79
LRFN4-202ENST00000393952 RAB20Q9NX57 234 aa26.21■■□□□ 1.79
LRFN4-202ENST00000393952 DERAQ9Y315 318 aa26.21■■□□□ 1.79
LRFN4-202ENST00000393952 RAG1P15918 1043 aa26.2■■□□□ 1.79
LRFN4-202ENST00000393952 RFC2P35250 354 aa26.2■■□□□ 1.79
LRFN4-202ENST00000393952 PIK3CAP42336 1068 aa26.2■■□□□ 1.79
LRFN4-202ENST00000393952 GUCY2FP51841 1108 aa26.2■■□□□ 1.79
LRFN4-202ENST00000393952 NT5DC4Q86YG4 428 aa26.2■■□□□ 1.79
LRFN4-202ENST00000393952 PGBD4Q96DM1 585 aa26.2■■□□□ 1.79
LRFN4-202ENST00000393952 ABHD8Q96I13 439 aa26.2■■□□□ 1.79
LRFN4-202ENST00000393952 C1orf112Q9NSG2 853 aa26.2■■□□□ 1.79
LRFN4-202ENST00000393952 SMIM28A0A1B0GU29 152 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 ENPP3O14638 875 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 KCNE1P15382 129 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 FAM189BP81408 668 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 LRMPQ12912 555 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 NCOA4Q13772 614 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 GJB7Q6PEY0 223 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 C1orf127Q8N9H9 656 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 ELMO3Q96BJ8 720 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 GAD1Q99259 594 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 PI4K2AQ9BTU6 479 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 GIT1Q9Y2X7 761 aa26.2■■□□□ 1.78
LRFN4-202ENST00000393952 TPM1P09493 284 aa26.19■■□□□ 1.78
LRFN4-202ENST00000393952 MLH1P40692 756 aa26.19■■□□□ 1.78
LRFN4-202ENST00000393952 ADKP55263 362 aaKnown RBP26.19■■□□□ 1.78
LRFN4-202ENST00000393952 POLR2FP61218 127 aaKnown RBP26.19■■□□□ 1.78
LRFN4-202ENST00000393952 ZBTB6Q15916 424 aa26.19■■□□□ 1.78
LRFN4-202ENST00000393952 C18orf25Q96B23 403 aaPredicted RBP26.19■■□□□ 1.78
LRFN4-202ENST00000393952 CAPN11Q9UMQ6 739 aa26.19■■□□□ 1.78
LRFN4-202ENST00000393952 FHOD1Q9Y613 1164 aa26.19■■□□□ 1.78
LRFN4-202ENST00000393952 MICAL3Q7RTP6 2002 aa26.18■■□□□ 1.78
LRFN4-202ENST00000393952 PTGESO14684 152 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms