RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 WDR44Q5JSH3 913 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 ALKBH5Q6P6C2 394 aaKnown RBP21.19■□□□□ 0.98
RAB5C-202ENST00000393860 VPS36Q86VN1 386 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 SHC3Q92529 594 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 NAPGQ99747 312 aaPredicted RBP21.19■□□□□ 0.98
RAB5C-202ENST00000393860 SYT11Q9BT88 431 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 GCOM2Q9BZD3 368 aaPredicted RBP21.19■□□□□ 0.98
RAB5C-202ENST00000393860 L2HGDHQ9H9P8 463 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 RPF1Q9H9Y2 349 aaKnown RBP21.19■□□□□ 0.98
RAB5C-202ENST00000393860 APOBEC3GQ9HC16 384 aaKnown RBP21.19■□□□□ 0.98
RAB5C-202ENST00000393860 MEFVO15553 781 aaPredicted RBP21.19■□□□□ 0.98
RAB5C-202ENST00000393860 CCDC172P0C7W6 258 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 MCF2P10911 925 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 NCOA4Q13772 614 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 TAF3Q5VWG9 929 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 PALB2Q86YC2 1186 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 FAM71AQ8IYT1 594 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 MTG1Q9BT17 334 aaPredicted RBP21.19■□□□□ 0.98
RAB5C-202ENST00000393860 LUC7LQ9NQ29 371 aaKnown RBP21.19■□□□□ 0.98
RAB5C-202ENST00000393860 XPNPEP3Q9NQH7 507 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 SRRDQ9UH36 339 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 NENFQ9UMX5 172 aa21.19■□□□□ 0.98
RAB5C-202ENST00000393860 CST3P01034 146 aaPredicted RBP21.18■□□□□ 0.98
RAB5C-202ENST00000393860 KRT5P13647 590 aa21.18■□□□□ 0.98
RAB5C-202ENST00000393860 TNFAIP3P21580 790 aa21.18■□□□□ 0.98
RAB5C-202ENST00000393860 BMS1Q14692 1282 aaKnown RBP21.18■□□□□ 0.98
RAB5C-202ENST00000393860 NAB2Q15742 525 aa21.18■□□□□ 0.98
RAB5C-202ENST00000393860 CATSPER4Q7RTX7 472 aa21.18■□□□□ 0.98
RAB5C-202ENST00000393860 TRAPPC11Q7Z392 1133 aa21.18■□□□□ 0.98
RAB5C-202ENST00000393860 SLC47A2Q86VL8 602 aa21.18■□□□□ 0.98
RAB5C-202ENST00000393860 AGPAT1Q99943 283 aa21.18■□□□□ 0.98
RAB5C-202ENST00000393860 UPF3AQ9H1J1 476 aaKnown RBP21.18■□□□□ 0.98
RAB5C-202ENST00000393860 SPC25Q9HBM1 224 aa21.18■□□□□ 0.98
RAB5C-202ENST00000393860 ZC3H11AO75152 810 aaKnown RBP eCLIP21.17■□□□□ 0.98
RAB5C-202ENST00000393860 YY1P25490 414 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 NAP1L1P55209 391 aaKnown RBP21.17■□□□□ 0.98
RAB5C-202ENST00000393860 NBPF20Q3BBV1 942 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 NOP9Q86U38 636 aaKnown RBP21.17■□□□□ 0.98
RAB5C-202ENST00000393860 SLC30A5Q8TAD4 765 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 TMEM40Q8WWA1 233 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 VTI1AQ96AJ9 217 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 NUB1Q9Y5A7 615 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 LACTBL1A8MY62 500 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 ADAMTS4O75173 837 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 NPTXRO95502 500 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 TFRCP02786 760 aaKnown RBP21.17■□□□□ 0.98
RAB5C-202ENST00000393860 ATP1A1P05023 1023 aaKnown RBP21.17■□□□□ 0.98
RAB5C-202ENST00000393860 NFICP08651 508 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 TMEM191BP0C7N4 346 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 FAM47CQ5HY64 1035 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 FMNL3Q8IVF7 1028 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 RPUSD2Q8IZ73 545 aaKnown RBP21.17■□□□□ 0.98
RAB5C-202ENST00000393860 TAS2R14Q9NYV8 317 aa21.17■□□□□ 0.98
RAB5C-202ENST00000393860 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.17■□□□□ 0.98
RAB5C-202ENST00000393860 V9GYY5 206 aaPredicted RBP21.17■□□□□ 0.98
RAB5C-202ENST00000393860 DARSP14868 501 aaKnown RBP21.16■□□□□ 0.98
RAB5C-202ENST00000393860 ANXA13P27216 316 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 MYL6P60660 151 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 NOP14P78316 857 aaKnown RBP21.16■□□□□ 0.98
RAB5C-202ENST00000393860 GCNT1Q02742 428 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 NAA30Q147X3 362 aaPredicted RBP21.16■□□□□ 0.98
RAB5C-202ENST00000393860 SURF1Q15526 300 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 DUOXA2Q1HG44 320 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 MRFAP1Q9Y605 127 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 A0A1B0GUA9 196 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 SLU7O95391 586 aaKnown RBP21.16■□□□□ 0.98
RAB5C-202ENST00000393860 CLTAP09496 248 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 HOXA11P31270 313 aaPredicted RBP21.16■□□□□ 0.98
RAB5C-202ENST00000393860 JADE1Q6IE81 842 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 TXLNBQ8N3L3 684 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 EPS8L1Q8TE68 723 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 CARD6Q9BX69 1037 aa21.16■□□□□ 0.98
RAB5C-202ENST00000393860 NOCTQ9UK39 431 aaKnown RBP21.16■□□□□ 0.98
RAB5C-202ENST00000393860 THSD7BQ9C0I4 1608 aa21.15■□□□□ 0.98
RAB5C-202ENST00000393860 KPNA6O60684 536 aa21.15■□□□□ 0.98
RAB5C-202ENST00000393860 TACC1O75410 805 aa21.15■□□□□ 0.98
RAB5C-202ENST00000393860 CHRNB2P17787 502 aa21.15■□□□□ 0.98
RAB5C-202ENST00000393860 HOXC8P31273 242 aa21.15■□□□□ 0.98
RAB5C-202ENST00000393860 GTF2F1P35269 517 aaKnown RBP eCLIP21.15■□□□□ 0.982e-6■■■□□ 14.6
RAB5C-202ENST00000393860 AP3M2P53677 418 aa21.15■□□□□ 0.98
RAB5C-202ENST00000393860 GDF6Q6KF10 455 aaPredicted RBP21.15■□□□□ 0.98
RAB5C-202ENST00000393860 ADPGKQ9BRR6 497 aa21.15■□□□□ 0.98
RAB5C-202ENST00000393860 CFHR5Q9BXR6 569 aa21.15■□□□□ 0.98
RAB5C-202ENST00000393860 EIF2AQ9BY44 585 aaKnown RBP21.15■□□□□ 0.98
RAB5C-202ENST00000393860 SCN10AQ9Y5Y9 1956 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 HTTP42858 3142 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 B4GALT4O60513 344 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 IL18RAPO95256 599 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 TNNC2P02585 160 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 ASGR1P07306 291 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 MMEP08473 750 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 GNAT1P11488 350 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 CUL2Q13617 745 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 SNX17Q15036 470 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 KCNA10Q16322 511 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 SLC10A6Q3KNW5 377 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 C10orf76Q5T2E6 689 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 RAET1EQ8TD07 263 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 ANKRD36BP1Q96IX9 119 aa21.14■□□□□ 0.98
RAB5C-202ENST00000393860 PCDHB18PQ96TA0 734 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms