RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 TNNI1P19237 187 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 ITIH2P19823 946 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 TCN1P20061 433 aaPredicted RBP17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 HIC1Q14526 733 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 BBOF1Q8ND07 529 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 TUBB6Q9BUF5 446 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 NUF2Q9BZD4 464 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CHKBQ9Y259 395 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 TDRKHQ9Y2W6 561 aaKnown RBP17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 SEC24DO94855 1032 aaPredicted RBP17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 NUDT17P0C025 328 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CASP5P51878 434 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 ADARP55265 1226 aaKnown RBP17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 MTHFD1LQ6UB35 978 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 UTS2BQ765I0 119 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CYP4X1Q8N118 509 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 DRAXINQ8NBI3 349 aaPredicted RBP17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 GRIP2Q9C0E4 1043 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 TMEM117Q9H0C3 514 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 DMAP1Q9NPF5 467 aaPredicted RBP17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CALCAP01258 141 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 RALAP11233 206 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 PRAMEP78395 509 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 PHEXP78562 749 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 TMEM259Q4ZIN3 620 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 GCNAQ96QF7 691 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 APOL6Q9BWW8 343 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 DNAAF2Q9NVR5 837 aaKnown RBP17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 NINJ2Q9NZG7 142 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 DOLKQ9UPQ8 538 aa17.98■□□□□ 0.47
TRAF3IP1-202ENST00000391993 GRM4Q14833 912 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CPNE8Q86YQ8 564 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 BTBD10Q9BSF8 475 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 MANSC1Q9H8J5 431 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 TAC1P20366 129 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 NEK3P51956 506 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 DDB1Q16531 1140 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CPA5Q8WXQ8 436 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 TMEM120AQ9BXJ8 343 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 PHACTR1Q9C0D0 580 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 ZNF219Q9P2Y4 722 aaPredicted RBP17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 SORBS3O60504 671 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 KRT10P13645 584 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 FOXN2P32314 431 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 FMO5P49326 533 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 SMIM5Q71RC9 77 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 IRF2BP2Q7Z5L9 587 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 RSPH3Q86UC2 560 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 ATL2Q8NHH9 583 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 ASAP3Q8TDY4 903 aa17.97■□□□□ 0.47
TRAF3IP1-202ENST00000391993 PEX1O43933 1283 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 NPTXRO95502 500 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 FAM182AQ5T1J6 154 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 C16orf87Q6PH81 154 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 PALB2Q86YC2 1186 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 RBM46Q8TBY0 533 aaKnown RBP17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 DCUN1D5Q9BTE7 237 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 RANBP17Q9H2T7 1088 aaKnown RBP17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 ARL8BQ9NVJ2 186 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CNOT7Q9UIV1 285 aaKnown RBP17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CSF1RP07333 972 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 BMP3P12645 472 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CD19P15391 556 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 BGNP21810 368 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 KLRC3Q07444 240 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 FUT2Q10981 343 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 ZNF394Q53GI3 561 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 FRMD5Q7Z6J6 570 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CRLF3Q8IUI8 442 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 SCUBE1Q8IWY4 988 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 WDR60Q8WVS4 1066 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 MAK16Q9BXY0 300 aaKnown RBP17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 STK33Q9BYT3 514 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 WNT8AQ9H1J5 351 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 KCNQ5Q9NR82 932 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 LMCD1Q9NZU5 365 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 FIS1Q9Y3D6 152 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 IGSF9BQ9UPX0 1349 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CYTH3O43739 400 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CLPTM1O96005 669 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 RASA2Q15283 850 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 CCDC92Q53HC0 331 aaPredicted RBP17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 WDR44Q5JSH3 913 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 LNPEPQ9UIQ6 1025 aa17.96■□□□□ 0.47
TRAF3IP1-202ENST00000391993 LIN7AO14910 233 aaPredicted RBP17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 GAS7O60861 476 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 TBX10O75333 385 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 LYNP07948 512 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 ZSCAN5DPP0CG00 497 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 ECHS1P30084 290 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 GSTO1P78417 241 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 MRPS9P82933 396 aaKnown RBP17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 ARMCX6Q7L4S7 300 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 TBC1D16Q8TBP0 767 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 LRRC15Q8TF66 581 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 USP6NLQ92738 828 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 MTA3Q9BTC8 594 aa17.95■□□□□ 0.46
TRAF3IP1-202ENST00000391993 PCMTD2Q9NV79 361 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms