RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 CNTN3Q9P232 1028 aa14.31□□□□□ -0.12
MRPL55-219ENST00000391867 SEL1LQ9UBV2 794 aa14.31□□□□□ -0.12
MRPL55-219ENST00000391867 TUBGCP4Q9UGJ1 667 aa14.31□□□□□ -0.12
MRPL55-219ENST00000391867 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
MRPL55-219ENST00000391867 IRAK3Q9Y616 596 aa14.31□□□□□ -0.12
MRPL55-219ENST00000391867 SF3B1O75533 1304 aaKnown RBP eCLIP14.31□□□□□ -0.122e-7■■■■■ 129.2
MRPL55-219ENST00000391867 OGTO15294 1046 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 LILRB3O75022 631 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 CLTAP09496 248 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 WEE2P0C1S8 567 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 KCNE1P15382 129 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 KLRC2P26717 231 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 BRCC3P46736 316 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 ACOT2P49753 483 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 GUCY2FP51841 1108 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 DSG1Q02413 1049 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 SMAD4Q13485 552 aaKnown RBP14.3□□□□□ -0.12
MRPL55-219ENST00000391867 ENOX2Q16206 610 aaKnown RBP14.3□□□□□ -0.12
MRPL55-219ENST00000391867 RTP2Q5QGT7 225 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 L1TD1Q5T7N2 865 aaKnown RBP14.3□□□□□ -0.12
MRPL55-219ENST00000391867 FAM171A1Q5VUB5 890 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 KIAA0319Q5VV43 1072 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 ANKRD54Q6NXT1 300 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 SYCE2Q6PIF2 218 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 CD300LGQ6UXG3 332 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 C12orf76Q8N812 135 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-219ENST00000391867 SMRP1Q8NCR6 262 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 ACCSQ96QU6 501 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 EMILIN2Q9BXX0 1053 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 OLFML3Q9NRN5 406 aa14.3□□□□□ -0.12
MRPL55-219ENST00000391867 USP15Q9Y4E8 981 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-219ENST00000391867 TTC26A0AVF1 554 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 LACTBL1A8MY62 500 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 PODXLO00592 558 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 TEX28O15482 410 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 ACTN4O43707 911 aaKnown RBP14.29□□□□□ -0.12
MRPL55-219ENST00000391867 SRGAP2BP0DMP2 458 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 SCP2P22307 547 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 ADSSP30520 456 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 AMPD3Q01432 767 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 PPP2R3AQ06190 1150 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 CUL4BQ13620 913 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 UPP1Q16831 310 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 USP41Q3LFD5 358 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 PUS10Q3MIT2 529 aaKnown RBP14.29□□□□□ -0.12
MRPL55-219ENST00000391867 ADALQ6DHV7 355 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 CEP57L1Q8IYX8 460 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 SYCP3Q8IZU3 236 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 ZSWIM2Q8NEG5 633 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 NOC3LQ8WTT2 800 aaKnown RBP14.29□□□□□ -0.12
MRPL55-219ENST00000391867 SLC22A17Q8WUG5 538 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 POMGNT1Q8WZA1 660 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 CASP10Q92851 521 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 HVCN1Q96D96 273 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 KIF12Q96FN5 646 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 C7orf25Q9BPX7 421 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 LRRC27Q9C0I9 530 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 GOLPH3LQ9H4A5 285 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 RPF1Q9H9Y2 349 aaKnown RBP14.29□□□□□ -0.12
MRPL55-219ENST00000391867 CD320Q9NPF0 282 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 CHST7Q9NS84 486 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 SLC38A7Q9NVC3 462 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 TTC28Q96AY4 2481 aa14.29□□□□□ -0.12
MRPL55-219ENST00000391867 FSD2A1L4K1 749 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 SPATA31D3P0C874 917 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 CMA1P23946 247 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 ABCD1P33897 745 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 CLCN4P51793 760 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 NDUFA8P51970 172 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 NUCB2P80303 420 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 RARS2Q5T160 578 aaKnown RBP14.28□□□□□ -0.12
MRPL55-219ENST00000391867 DCLRE1AQ6PJP8 1040 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 TMEM184AQ6ZMB5 413 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 SPATA31D4Q6ZUB0 917 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 PALB2Q86YC2 1186 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 FSIP1Q8NA03 581 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 SAAL1Q96ER3 474 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 UROC1Q96N76 676 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 CBWD1Q9BRT8 395 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 TTPALQ9BTX7 342 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 SCAND2PQ9GZW5 306 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-219ENST00000391867 MAGEF1Q9HAY2 307 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 STK39Q9UEW8 545 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 CPSF3Q9UKF6 684 aaKnown RBP14.28□□□□□ -0.12
MRPL55-219ENST00000391867 AGO2Q9UKV8 859 aaKnown RBP14.28□□□□□ -0.12
MRPL55-219ENST00000391867 EXOC7Q9UPT5 735 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 HPSEQ9Y251 543 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 PCDHB13Q9Y5F0 798 aa14.28□□□□□ -0.12
MRPL55-219ENST00000391867 VWA8A3KMH1 1905 aa14.27□□□□□ -0.12
MRPL55-219ENST00000391867 PDCD11Q14690 1871 aaKnown RBP14.27□□□□□ -0.12
MRPL55-219ENST00000391867 GOLGA8IPA6NC78 632 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 GOLGA8JA6NMD2 632 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 TNFRSF10AO00220 468 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 ADH1AP07327 375 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 NFICP08651 508 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 SLFN14P0C7P3 912 aa14.27□□□□□ -0.13
MRPL55-219ENST00000391867 SP100P23497 879 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-219ENST00000391867 TKTP29401 623 aaKnown RBP14.27□□□□□ -0.13
MRPL55-219ENST00000391867 SSTR3P32745 418 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms