RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 AGXTP21549 392 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 FGFR4P22455 802 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 PLA2G5P39877 138 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 SLC5A3P53794 718 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 MTM1Q13496 603 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 EGFLAMQ63HQ2 1017 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 OTUD7BQ6GQQ9 843 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 SEM1Q6ZVN7 128 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 UBE3BQ7Z3V4 1068 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 PRIMA1Q86XR5 153 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 ATL2Q8NHH9 583 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.64□□□□□ -1.67
TRAV40-201ENST00000390467 MOCS1Q9NZB8 636 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 USP25Q9UHP3 1055 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 DNM3Q9UQ16 869 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 ATP11BQ9Y2G3 1177 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 A0A1B0GTW7 788 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 KIAA0355O15063 1070 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 PPFIA2O75334 1257 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 HLA-DOAP06340 250 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 HKR1P10072 659 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 ITGAMP11215 1152 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 GCSHP23434 173 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 USP14P54578 494 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 ATP8B2P98198 1209 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 TAP1Q03518 808 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 FAPQ12884 760 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 KLF1Q13351 362 aaPredicted RBP4.63□□□□□ -1.67
TRAV40-201ENST00000390467 GJC2Q5T442 439 aaPredicted RBP4.63□□□□□ -1.67
TRAV40-201ENST00000390467 RNF219Q5W0B1 726 aaPredicted RBP4.63□□□□□ -1.67
TRAV40-201ENST00000390467 FAM180AQ6UWF9 173 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 GPR149Q86SP6 731 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 CBARPQ8N350 705 aaPredicted RBP4.63□□□□□ -1.67
TRAV40-201ENST00000390467 TMEM132CQ8N3T6 1108 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 SUPT20HQ8NEM7 779 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 CCHCR1Q8TD31 782 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 NTN5Q8WTR8 489 aaPredicted RBP4.63□□□□□ -1.67
TRAV40-201ENST00000390467 CASKIN2Q8WXE0 1202 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 DPF2Q92785 391 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 RAB24Q969Q5 203 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 RNF31Q96EP0 1072 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 COQ10AQ96MF6 247 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 BBC3Q96PG8 261 aaPredicted RBP4.63□□□□□ -1.67
TRAV40-201ENST00000390467 ALOXE3Q9BYJ1 711 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 ZNHIT2Q9UHR6 403 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 ZBTB21Q9ULJ3 1066 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 PHLDB1Q86UU1 1377 aa4.63□□□□□ -1.67
TRAV40-201ENST00000390467 ZFPL1O95159 310 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 POMCP01189 267 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 IARSP41252 1262 aaKnown RBP4.62□□□□□ -1.67
TRAV40-201ENST00000390467 CXADRP78310 365 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 HSD11B2P80365 405 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 UBXN2BQ14CS0 331 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 ABHD17BQ5VST6 288 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 DDX42Q86XP3 938 aaKnown RBP eCLIP4.62□□□□□ -1.67
TRAV40-201ENST00000390467 SLC44A3Q8N4M1 653 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 CNTD1Q8N815 330 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 DCBLD1Q8N8Z6 715 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 NRG4Q8WWG1 115 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 CAVIN3Q969G5 261 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 NACC2Q96BF6 587 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 R3HDMLQ9H3Y0 253 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 RIOX1Q9H6W3 641 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 ALG13Q9NP73 1137 aaKnown RBP4.62□□□□□ -1.67
TRAV40-201ENST00000390467 TMEM140Q9NV12 185 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 FAM30AQ9NZY2 134 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 TUBD1Q9UJT1 453 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 PRKAB1Q9Y478 270 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 WASHC2AQ641Q2 1341 aa4.62□□□□□ -1.67
TRAV40-201ENST00000390467 TCRBV7S2A1N4TA0A589 114 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 TRIM75PA6NK02 468 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 ZAR1LA6NP61 321 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 FAM171A2A8MVW0 826 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 FOSP01100 380 aaPredicted RBP4.61□□□□□ -1.67
TRAV40-201ENST00000390467 FDXRP22570 491 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 SLC6A4P31645 630 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 AVPR1BP47901 424 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 PTH2RP49190 550 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 NOMO3P69849 1222 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 SLFN5Q08AF3 891 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 INAVAQ3KP66 663 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 NOMO2Q5JPE7 1267 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 DPY19L2P1Q6NXN4 242 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 PPM1NQ8N819 430 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 FUBP1Q96AE4 644 aaKnown RBP4.61□□□□□ -1.67
TRAV40-201ENST00000390467 RNPEPQ9H4A4 650 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 RNF181Q9P0P0 153 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 HSFX1Q9UBD0 423 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 SALL3Q9BXA9 1300 aa4.61□□□□□ -1.67
TRAV40-201ENST00000390467 CDHR4A6H8M9 788 aa4.6□□□□□ -1.67
TRAV40-201ENST00000390467 DDCP20711 480 aa4.6□□□□□ -1.67
TRAV40-201ENST00000390467 MPLP40238 635 aa4.6□□□□□ -1.67
TRAV40-201ENST00000390467 TARDBPQ13148 414 aaKnown RBP eCLIP4.6□□□□□ -1.67
TRAV40-201ENST00000390467 ADGRG3Q86Y34 549 aa4.6□□□□□ -1.67
TRAV40-201ENST00000390467 ZNF764Q96H86 408 aaPredicted RBP4.6□□□□□ -1.67
TRAV40-201ENST00000390467 Q96MF0 132 aa4.6□□□□□ -1.67
TRAV40-201ENST00000390467 KCNE5Q9UJ90 142 aa4.6□□□□□ -1.67
TRAV40-201ENST00000390467 INTUQ9ULD6 942 aa4.6□□□□□ -1.67
TRAV40-201ENST00000390467 MAST3O60307 1309 aa4.6□□□□□ -1.67
TRAV40-201ENST00000390467 MYBBP1AQ9BQG0 1328 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms