RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 FSIP1Q8NA03 581 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 OR6P1Q8NGX9 317 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 SOCS4Q8WXH5 440 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 CTAGE1Q96RT6 745 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 RMDN3Q96TC7 470 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 BAG1Q99933 345 aaPredicted RBP8.17□□□□□ -1.1
TRBV28-201ENST00000390400 SDF4Q9BRK5 362 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 IRX2Q9BZI1 471 aaPredicted RBP8.17□□□□□ -1.1
TRBV28-201ENST00000390400 ARHGAP39Q9C0H5 1083 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 FANCLQ9NW38 375 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 SLC5A4Q9NY91 659 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 KCNK4Q9NYG8 393 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 IFNKQ9P0W0 207 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 VPS18Q9P253 973 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 ITIH6Q6UXX5 1313 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 DNAJC25-GNG10A0A024R161 153 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 LOC102724159A0A0B4J2E5 919 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CTAGE15A4D2H0 777 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CTAGE9A4FU28 777 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 ZSWIM8A7E2V4 1837 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 MEIS3P2A8K0S8 358 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 DCDC2CA8MYV0 355 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 B4DLN1 442 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 GOLGA8KD6RF30 607 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 H3BQF6 201 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 PPP6R2O75170 966 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CTAGE8P0CG41 777 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 SREBF1P36956 1147 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 RGS2P41220 211 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 UBASH3AP57075 661 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 GNG11P61952 73 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CNTN2Q02246 1040 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 IFFO1Q0D2I5 559 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CASP8Q14790 479 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 FRMPD4Q14CM0 1322 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 ARHGEF6Q15052 776 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 PWP2Q15269 919 aaKnown RBP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 POU4F3Q15319 338 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 ZKSCAN8Q15776 578 aaPredicted RBP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 INF2Q27J81 1249 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 PLEKHG4Q58EX7 1191 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 EARS2Q5JPH6 523 aaKnown RBP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 ARHGEF16Q5VV41 709 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 SPECC1LQ69YQ0 1117 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CCDC70Q6NSX1 233 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 C6orf15Q6UXA7 325 aaPredicted RBP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 LRRC31Q6UY01 552 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 SLCO4C1Q6ZQN7 724 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CYFIP1Q7L576 1253 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 NEK8Q86SG6 692 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 DPP9Q86TI2 863 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CTAGE6Q86UF2 777 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 TMEM139Q8IV31 216 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 APLFQ8IW19 511 aaPredicted RBP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CTAGE4Q8IX94 777 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 RPTORQ8N122 1335 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 FAM133AQ8N9E0 248 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CNNM3Q8NE01 707 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 DNERQ8NFT8 737 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CD99L2Q8TCZ2 262 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 NSUN6Q8TEA1 469 aaKnown RBP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 TBCKQ8TEA7 893 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 TAAR1Q96RJ0 339 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 MPHOSPH6Q99547 160 aaKnown RBP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 ACTR5Q9H9F9 607 aaPredicted RBP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 BATF3Q9NR55 127 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 PXMP2Q9NR77 195 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 COL20A1Q9P218 1284 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 NXF1Q9UBU9 619 aaKnown RBP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 REV1Q9UBZ9 1251 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 ADD3Q9UEY8 706 aaKnown RBP8.16□□□□□ -1.1
TRBV28-201ENST00000390400 LCMT1Q9UIC8 334 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CASP8AP2Q9UKL3 1982 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 PCDHGC5Q9Y5F6 944 aa8.16□□□□□ -1.1
TRBV28-201ENST00000390400 CEP350Q5VT06 3117 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 A0A1B0GUA9 196 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 SLC22A31A6NKX4 558 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 H3BM21 787 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 RBAK-RBAKDNI3L0D1 243 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 OPA1O60313 960 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 COBLO75128 1261 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 HOXD10P28358 340 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 CTGFP29279 349 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 CCND2P30279 289 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 RDXP35241 583 aaKnown RBP8.15□□□□□ -1.1
TRBV28-201ENST00000390400 TRAPPC10P48553 1259 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 ALDH5A1P51649 535 aaPredicted RBP8.15□□□□□ -1.1
TRBV28-201ENST00000390400 SLC8A3P57103 927 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 SETDB1Q15047 1291 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 ZNF792Q3KQV3 632 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 RILPL1Q5EBL4 403 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 SCARA3Q6AZY7 606 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 OVOS1Q6IE37 1185 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 XRRA1Q6P2D8 792 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 C12orf40Q86WS4 652 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 CNGA4Q8IV77 575 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 MLKLQ8NB16 471 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 GIMAP7Q8NHV1 300 aa8.15□□□□□ -1.1
TRBV28-201ENST00000390400 IWS1Q96ST2 819 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms