RNA–Protein interactions for RNA: ENST00000389900.8

RNF216-201, Transcript of ring finger protein 216, humanhuman

TSL 1 (best)

Gene RNF216, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216-201ENST00000389900 RAPH1Q70E73 1250 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 IFNL3Q8IZI9 196 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 CEP70Q8NHQ1 597 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 DACT3Q96B18 629 aaPredicted RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 FAM89AQ96GI7 184 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 DNAJC1Q96KC8 554 aaKnown RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 DBNDD2Q9BQY9 259 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 PLA2G12BQ9BX93 195 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 KCTD10Q9H3F6 313 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 TRMT112Q9UI30 125 aaKnown RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 SOX13Q9UN79 622 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 PCDHB13Q9Y5F0 798 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 NUP188Q5SRE5 1749 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 CCT8L1PA6NM43 557 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 TK2O00142 265 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 CNOT3O75175 753 aaKnown RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 FGF18O76093 207 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 TJP3O95049 919 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 NPPAP01160 153 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 CYP1A1P04798 512 aaPredicted RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 POLR2CP19387 275 aaPredicted RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 ADSLP30566 484 aaPredicted RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 PTDSS1P48651 473 aaKnown RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 CLK3P49761 638 aaKnown RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 RCN2Q14257 317 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 SF3B4Q15427 424 aaKnown RBP eCLIP9.82□□□□□ -0.841e-9■■■□□ 18.2
RNF216-201ENST00000389900 SGO2Q562F6 1265 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 FAM180BQ6P0A1 224 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 FAM122CQ6P4D5 195 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 ATG9AQ7Z3C6 839 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 TTC6Q86TZ1 520 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 CCDC116Q8IYX3 515 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 SCYL3Q8IZE3 742 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 RNF169Q8NCN4 708 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 PJA1Q8NG27 643 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 IFT74Q96LB3 600 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 MRPL1Q9BYD6 325 aaKnown RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 IFT22Q9H7X7 185 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 UCKL1Q9NWZ5 548 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 AGO2Q9UKV8 859 aaKnown RBP9.82□□□□□ -0.84
RNF216-201ENST00000389900 SLC12A4Q9UP95 1085 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 TRAF3IP3Q9Y228 551 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 PCDHGA11Q9Y5H2 935 aa9.82□□□□□ -0.84
RNF216-201ENST00000389900 WNK3Q9BYP7 1800 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 E9PBE3 544 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 ZNF16P17020 682 aaPredicted RBP9.81□□□□□ -0.84
RNF216-201ENST00000389900 HSPA6P17066 643 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 M6PRP20645 277 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 DNAJB1P25685 340 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 RCVRNP35243 200 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 TTMPQ5BVD1 217 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 PPP4R3AQ6IN85 833 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 USP43Q70EL4 1123 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 ITIH5Q86UX2 942 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 KSR1Q8IVT5 923 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 BBS5Q8N3I7 341 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 MARCH10Q8NA82 808 aaPredicted RBP9.81□□□□□ -0.84
RNF216-201ENST00000389900 SHCBP1Q8NEM2 672 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 TTLQ8NG68 377 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 GAB3Q8WWW8 586 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 GMLQ99445 158 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 RIOK1Q9BRS2 568 aaKnown RBP9.81□□□□□ -0.84
RNF216-201ENST00000389900 DOLKQ9UPQ8 538 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 DOT1LQ8TEK3 1739 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 LOC102724428A0A0B4J2F2 783 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 ERVV-1B6SEH8 477 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 H3BQV1 296 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 CYP21A2P08686 494 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 ATF6P18850 670 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 TRIM23P36406 574 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 SIK1P57059 783 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 EXOSC10Q01780 885 aaKnown RBP9.81□□□□□ -0.84
RNF216-201ENST00000389900 RASGRF1Q13972 1273 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 IFFO2Q5TF58 517 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 FAM196AQ6ZSG2 479 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.81□□□□□ -0.84
RNF216-201ENST00000389900 SECISBP2Q96T21 854 aaKnown RBP9.81□□□□□ -0.84
RNF216-201ENST00000389900 STK33Q9BYT3 514 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.81□□□□□ -0.843e-6■■■□□ 14.6
RNF216-201ENST00000389900 MRPL39Q9NYK5 338 aaKnown RBP9.81□□□□□ -0.84
RNF216-201ENST00000389900 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.81□□□□□ -0.84
RNF216-201ENST00000389900 AIPL1Q9NZN9 384 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 RNF112Q9ULX5 631 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 USTQ9Y2C2 406 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 WDR19Q8NEZ3 1342 aa9.81□□□□□ -0.84
RNF216-201ENST00000389900 TYW5A2RUC4 315 aaKnown RBP9.8□□□□□ -0.84
RNF216-201ENST00000389900 F8W810 466 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 PFDN6O15212 129 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 RARBP10826 455 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 MUTP22033 750 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 SOX5P35711 763 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 TXKP42681 527 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 RAB15P59190 212 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 TRAP1Q12931 704 aaKnown RBP9.8□□□□□ -0.84
RNF216-201ENST00000389900 RESTQ13127 1097 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 GRM1Q13255 1194 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 NNTQ13423 1086 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 RAPGEF1Q13905 1077 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 Q3ZCU0 254 aa9.8□□□□□ -0.84
RNF216-201ENST00000389900 SHEQ5VZ18 495 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms