RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 TEX28O15482 410 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 ME3Q16798 604 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 SYCP2LQ5T4T6 812 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 LLGL2Q6P1M3 1020 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 CNKSR1Q969H4 720 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 DHTKD1Q96HY7 919 aaPredicted RBP12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 CCT8L1PA6NM43 557 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 KLHL2O95198 593 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 MPP2Q14168 576 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 RNF219Q5W0B1 726 aaPredicted RBP12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 CITED4Q96RK1 184 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 DCUN1D5Q9BTE7 237 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 WDR11Q9BZH6 1224 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 EML4Q9HC35 981 aaKnown RBP12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 HPS4Q9NQG7 708 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 CHKBQ9Y259 395 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 PCDHA1Q9Y5I3 950 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 MAGEA2P43356 314 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 CBFBQ13951 182 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 MYBPC2Q14324 1141 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 SPANXN2Q5MJ10 180 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 CDHR1Q96JP9 859 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 AK8Q96MA6 479 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 C7orf25Q9BPX7 421 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 BAIAP2Q9UQB8 552 aa12.96□□□□□ -0.33
SMARCA2-209ENST00000382203 hCG_1984214I3L0E3 225 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 RAD51BO15315 384 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 ECE2O60344 883 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 CCNIQ14094 377 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 PTPN21Q16825 1174 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 ZNF713Q8N859 430 aaPredicted RBP12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 WDR36Q8NI36 951 aaKnown RBP12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 TRAPPC9Q96Q05 1148 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 ALG13Q9NP73 1137 aaKnown RBP12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 COPG2Q9UBF2 871 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 SH3GLB1Q9Y371 365 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 ABCC12Q96J65 1359 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 TSPAN4O14817 238 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 TJP3O95049 919 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 NR2F2P24468 414 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 HOXA7P31268 230 aaPredicted RBP12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 DNAJC10Q8IXB1 793 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 SENP1Q9P0U3 644 aa12.96□□□□□ -0.34
SMARCA2-209ENST00000382203 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 SERPING1P05155 500 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 DDX5P17844 614 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 PURAQ00577 322 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 EPS8Q12929 822 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 ZBTB33Q86T24 672 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 PRUNE1Q86TP1 453 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 TSSK1BQ9BXA7 367 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 VAV3Q9UKW4 847 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 ZNF518AQ6AHZ1 1483 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 CNOT3O75175 753 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 MXD4Q14582 209 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 TTC29Q8NA56 475 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 HEXIM2Q96MH2 286 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 GTF2A1LQ9UNN4 478 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 EDC4Q6P2E9 1401 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 SMIM31A0A1B0GVY4 71 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 SNTNA6NMZ2 147 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 NEURL1BA8MQ27 555 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 ADCY9O60503 1353 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 LRRN2O75325 713 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 PSAPP07602 524 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 PSMA4P25789 261 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 TYK2P29597 1187 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 SLC16A1P53985 500 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 TRAP1Q12931 704 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 TRADDQ15628 312 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 RNF19BQ6ZMZ0 732 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 KIAA0408Q6ZU52 694 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 CCDC36Q8IYA8 594 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 RBBP8NLQ8NC74 664 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 WDR48Q8TAF3 677 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 CCDC17Q96LX7 622 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 EGFL8Q99944 293 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 CCDC189A1A4V9 331 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 NDUFA8P51970 172 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 EXOSC10Q01780 885 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 BYSLQ13895 437 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 RASGRF1Q13972 1273 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 MAN2A1Q16706 1144 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 DGKKQ5KSL6 1271 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 GPATCH4Q5T3I0 446 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 ULK3Q6PHR2 472 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 RASSF6Q6ZTQ3 369 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 VSTM4Q8IW00 320 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 SDR42E1Q8WUS8 393 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 PACSIN1Q9BY11 444 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 FAM192AQ9GZU8 254 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 TAF1DQ9H5J8 278 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 SYNGAP1Q96PV0 1343 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 ESYT3A0FGR9 886 aa12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 RTN3O95197 1032 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-209ENST00000382203 SFNP31947 248 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms