RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 NFIL3Q16649 462 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PHKG1Q16816 387 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 IL31Q6EBC2 164 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 SSH2Q76I76 1423 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 FLAD1Q8NFF5 587 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 RGS12O14924 1447 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PIPSLA2A3N6 862 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 TRIM49BA6NDI0 452 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 EVPLLA8MZ36 301 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PRKAB2O43741 272 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 STRNO43815 780 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PSMD7P51665 324 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 JAK3P52333 1124 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 CSTF3Q12996 717 aaKnown RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 ARHGEF7Q14155 803 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 MIER2Q8N344 545 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 XXYLT1Q8NBI6 393 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 NSUN7Q8NE18 718 aaKnown RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 EXD1Q8NHP7 514 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 WNT8AQ9H1J5 351 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PLEKHA5Q9HAU0 1116 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 CNGB3Q9NQW8 809 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 ABHD10Q9NUJ1 306 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 MAP10Q9P2G4 905 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 LCMT1Q9UIC8 334 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 ATP1A3P13637 1013 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 TBXAS1P24557 533 aaPredicted RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 STX3Q13277 289 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 TRIP10Q15642 601 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 SLC30A9Q6PML9 568 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 CYFIP1Q7L576 1253 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 SPATA21Q7Z572 469 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 FAM160B2Q86V87 743 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 SFR1Q86XK3 245 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 RTL3Q8N8U3 475 aaKnown RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 CALML6Q8TD86 181 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PTPRN2Q92932 1015 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 GLMNQ92990 594 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 TSEN34Q9BSV6 310 aaKnown RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 HDHD2Q9H0R4 259 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 CAAP1Q9H8G2 361 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PI4KBQ9UBF8 816 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 ABCB11O95342 1321 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PRR23AA6NEV1 266 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 ZBTB39O15060 712 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 EIF4A1P60842 406 aaKnown RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 CSNK2BP67870 215 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 KIF23Q02241 960 aaPredicted RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 COG2Q14746 738 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 USPL1Q5W0Q7 1092 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 MTHFD1LQ6UB35 978 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 SPATA2LQ8IUW3 424 aaPredicted RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 RHOT1Q8IXI2 618 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 NARS2Q96I59 477 aaKnown RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 PUS3Q9BZE2 481 aaKnown RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.16□□□□□ -1.42
RFX3-204ENST00000382004 KCNH2Q12809 1159 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 GAS2L3Q86XJ1 694 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 C19orf18Q8NEA5 215 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 TSPAN17Q96FV3 270 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 WNK4Q96J92 1243 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 RMDN3Q96TC7 470 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 KIAA1586Q9HCI6 787 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 PCMTD2Q9NV79 361 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 SLC30A1Q9Y6M5 507 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 ALDH1A2O94788 518 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 COX10Q12887 443 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 DRAP1Q14919 205 aaPredicted RBP6.15□□□□□ -1.42
RFX3-204ENST00000382004 UBE3CQ15386 1083 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 SLC25A24Q6NUK1 477 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 TRIM48Q8IWZ4 208 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 SLC25A41Q8N5S1 370 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 ATP6V1G3Q96LB4 118 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 EPN3Q9H201 632 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 MAP3K20Q9NYL2 800 aaKnown RBP6.15□□□□□ -1.42
RFX3-204ENST00000382004 HDAC6Q9UBN7 1215 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 E9PBE3 544 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 GSTM1P09488 218 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 TWF1Q12792 350 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 TNIP2Q8NFZ5 429 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 PNKPQ96T60 521 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 ECSITQ9BQ95 431 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 PARVAQ9NVD7 372 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 PCDHA6Q9UN73 950 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 LEMD3Q9Y2U8 911 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 PCDHA8Q9Y5H6 950 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 FANCAO15360 1455 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 ARID5BQ14865 1188 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 WLSQ5T9L3 541 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 TTC33Q6PID6 262 aaPredicted RBP6.15□□□□□ -1.42
RFX3-204ENST00000382004 LINC00301Q8NCQ3 95 aa6.15□□□□□ -1.42
RFX3-204ENST00000382004 GIMAP8Q8ND71 665 aaPredicted RBP6.15□□□□□ -1.42
RFX3-204ENST00000382004 RAVER2Q9HCJ3 691 aaKnown RBP6.15□□□□□ -1.42
RFX3-204ENST00000382004 C3orf70A6NLC5 250 aaPredicted RBP6.15□□□□□ -1.43
RFX3-204ENST00000382004 PEX1O43933 1283 aa6.15□□□□□ -1.43
RFX3-204ENST00000382004 CLASP2O75122 1294 aaKnown RBP6.15□□□□□ -1.43
RFX3-204ENST00000382004 MTRF1O75570 445 aaKnown RBP6.15□□□□□ -1.43
RFX3-204ENST00000382004 PDE8BO95263 885 aa6.15□□□□□ -1.43
RFX3-204ENST00000382004 CASP1P29466 404 aa6.15□□□□□ -1.43
RFX3-204ENST00000382004 PRIM2P49643 509 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms