RNA–Protein interactions for RNA: ENST00000378825.4

CCDC3-201, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC3, Length 2,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-201ENST00000378825 ECE2O60344 883 aa19.69■□□□□ 0.74
CCDC3-201ENST00000378825 ATP11AP98196 1134 aa19.69■□□□□ 0.74
CCDC3-201ENST00000378825 CDCA2Q69YH5 1023 aaPredicted RBP19.69■□□□□ 0.74
CCDC3-201ENST00000378825 ANKS1BQ7Z6G8 1248 aa19.69■□□□□ 0.74
CCDC3-201ENST00000378825 FAM71AQ8IYT1 594 aa19.69■□□□□ 0.74
CCDC3-201ENST00000378825 MASTLQ96GX5 879 aa19.69■□□□□ 0.74
CCDC3-201ENST00000378825 IFT74Q96LB3 600 aa19.69■□□□□ 0.74
CCDC3-201ENST00000378825 CCDC17Q96LX7 622 aa19.69■□□□□ 0.74
CCDC3-201ENST00000378825 PI4KBQ9UBF8 816 aa19.69■□□□□ 0.74
CCDC3-201ENST00000378825 ANAPC7Q9UJX3 599 aa19.69■□□□□ 0.74
CCDC3-201ENST00000378825 ANAPC5Q9UJX4 755 aa19.69■□□□□ 0.74
CCDC3-201ENST00000378825 PIAS1O75925 651 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 CYP1A2P05177 515 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 CHRNA5P30532 468 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 SSTR3P32745 418 aaPredicted RBP19.68■□□□□ 0.74
CCDC3-201ENST00000378825 GRIK3Q13003 919 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 TUFT1Q9NNX1 390 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 A0A1W2PRG0 241 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 RASA4BC9J798 803 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 RASA4O43374 803 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 CBX6O95503 412 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 FOSP01100 380 aaPredicted RBP19.68■□□□□ 0.74
CCDC3-201ENST00000378825 BMP3P12645 472 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 SPIRE2Q8WWL2 714 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 MKL1Q969V6 931 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 MAGEB18Q96M61 343 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 STRA6Q9BX79 667 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 KIAA1683Q9H0B3 1180 aa19.68■□□□□ 0.74
CCDC3-201ENST00000378825 MTA2O94776 668 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 GH2P01242 217 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 CYP11B1P15538 503 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 GJC1P36383 396 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 TUBP50607 506 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 AOC3Q16853 763 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 CCDC174Q6PII3 467 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 CBWD2Q8IUF1 395 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 GLIS1Q8NBF1 620 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 BATF3Q9NR55 127 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 NUMBLQ9Y6R0 609 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 CLGNO14967 610 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 LINGO3P0C6S8 592 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 FGFR1P11362 822 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 ATF2P15336 505 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 ITIH2P19823 946 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 MXI1P50539 228 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 PRELPP51888 382 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 TCEAL1Q15170 157 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 DACT2Q5SW24 774 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 PODNQ7Z5L7 613 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 VSIG1Q86XK7 387 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 TTC8Q8TAM2 541 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 ZNF483Q8TF39 744 aaPredicted RBP19.67■□□□□ 0.74
CCDC3-201ENST00000378825 SAAL1Q96ER3 474 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 GPRC5CQ9NQ84 441 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 NKIRAS1Q9NYS0 192 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 HSPBP1Q9NZL4 362 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 NYAP2Q9P242 653 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 ZBTB21Q9ULJ3 1066 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.67■□□□□ 0.74
CCDC3-201ENST00000378825 ARHGEF35A5YM69 484 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 PPP1R12AO14974 1030 aaPredicted RBP19.67■□□□□ 0.74
CCDC3-201ENST00000378825 PEX11AO75192 247 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 FASTKD3Q14CZ7 662 aaKnown RBP19.67■□□□□ 0.74
CCDC3-201ENST00000378825 RNF43Q68DV7 783 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 C4orf33Q8N1A6 199 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 SUPT20HQ8NEM7 779 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 PI4K2AQ9BTU6 479 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 DCLK3Q9C098 648 aa19.67■□□□□ 0.74
CCDC3-201ENST00000378825 EPHB2P29323 1055 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 ABCB5Q2M3G0 1257 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 NAF1Q96HR8 494 aaKnown RBP19.66■□□□□ 0.74
CCDC3-201ENST00000378825 KLHL11Q9NVR0 708 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 GTF3C4Q9UKN8 822 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 PRR12Q9ULL5 1215 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 GRIN3BO60391 1043 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 APBA3O96018 575 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 PDHA1P08559 390 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 T-ENOLP0DO92 83 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 RALAP11233 206 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 GZMAP12544 262 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 SATB1Q01826 763 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 PPP2R5CQ13362 524 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 BLMHQ13867 455 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 PADI6Q6TGC4 694 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 INTS8Q75QN2 995 aaKnown RBP19.66■□□□□ 0.74
CCDC3-201ENST00000378825 FAM13CQ8NE31 585 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 NACC1Q96RE7 527 aa19.66■□□□□ 0.74
CCDC3-201ENST00000378825 ENTPD5O75356 428 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 GCAP28676 217 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 ECE1P42892 770 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 PTK6Q13882 451 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 ARHGEF18Q6ZSZ5 1173 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 SLC9A9Q8IVB4 645 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 CPA5Q8WXQ8 436 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 KIFC3Q9BVG8 833 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 OSBPL1AQ9BXW6 950 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 SEL1LQ9UBV2 794 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 PHTF1Q9UMS5 762 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 ADGRA3Q8IWK6 1321 aa19.65■□□□□ 0.74
CCDC3-201ENST00000378825 GSTTP1A0A1W2PQM5 241 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms