RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 SWT1Q5T5J6 900 aaKnown RBP19.43■□□□□ 0.7
TDP2-202ENST00000378198 CCDC197Q8NCU1 140 aa19.43■□□□□ 0.7
TDP2-202ENST00000378198 MCPH1Q8NEM0 835 aa19.43■□□□□ 0.7
TDP2-202ENST00000378198 UHMK1Q8TAS1 419 aaKnown RBP19.43■□□□□ 0.7
TDP2-202ENST00000378198 GRK7Q8WTQ7 553 aa19.43■□□□□ 0.7
TDP2-202ENST00000378198 C1orf54Q8WWF1 131 aa19.43■□□□□ 0.7
TDP2-202ENST00000378198 DOCK5Q9H7D0 1870 aa19.43■□□□□ 0.7
TDP2-202ENST00000378198 GABBR1Q9UBS5 961 aa19.43■□□□□ 0.7
TDP2-202ENST00000378198 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.43■□□□□ 0.7
TDP2-202ENST00000378198 COL11A1P12107 1806 aaPredicted RBP19.42■□□□□ 0.7
TDP2-202ENST00000378198 H0YCG3 227 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 DGAT1O75907 488 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 UBAP2Q5T6F2 1119 aaKnown RBP19.42■□□□□ 0.7
TDP2-202ENST00000378198 C15orf39Q6ZRI6 1047 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 VSIG10LQ86VR7 867 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 CCDC25Q86WR0 208 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 NIM1KQ8IY84 436 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 ANKS4BQ8N8V4 417 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 CCT6BQ92526 530 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 KIAA1586Q9HCI6 787 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 PCDHB2Q9Y5E7 798 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 MROH7Q68CQ1 1323 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 MYH9P35579 1960 aaKnown RBP19.42■□□□□ 0.7
TDP2-202ENST00000378198 RASSF9O75901 435 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 STBD1O95210 358 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 CAV1Q03135 178 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 PTK6Q13882 451 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 RHBDF2Q6PJF5 856 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 SNF8Q96H20 258 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 FAM213AQ9BRX8 229 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 PI4K2AQ9BTU6 479 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 CDC42EP4Q9H3Q1 356 aaKnown RBP19.42■□□□□ 0.7
TDP2-202ENST00000378198 PDLIM7Q9NR12 457 aa19.42■□□□□ 0.7
TDP2-202ENST00000378198 MYPNQ86TC9 1320 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 DNM1LO00429 736 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 SLCO1A2P46721 670 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 MNAT1P51948 309 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 DGKZQ13574 1117 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 PIGWQ7Z7B1 504 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 BICD1Q96G01 975 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 IFT74Q96LB3 600 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 SERPINB12Q96P63 405 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 ASIC3Q9UHC3 531 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 KCNG1Q9UIX4 513 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 ADGRA3Q8IWK6 1321 aa19.41■□□□□ 0.7
TDP2-202ENST00000378198 ZNF862O60290 1169 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 GAS8O95995 478 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 PSAPP07602 524 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 NR3C2P08235 984 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 ATP5DP30049 168 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 SOX10P56693 466 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 CLDN10P78369 228 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 PTP4A2Q12974 167 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 SNX1Q13596 522 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 BAATQ14032 418 aaPredicted RBP19.4■□□□□ 0.7
TDP2-202ENST00000378198 ITIH4Q14624 930 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 WDR44Q5JSH3 913 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 PRMT1Q99873 361 aaKnown RBP19.4■□□□□ 0.7
TDP2-202ENST00000378198 RPAP3Q9H6T3 665 aaPredicted RBP19.4■□□□□ 0.7
TDP2-202ENST00000378198 SLC40A1Q9NP59 571 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 MYOZ2Q9NPC6 264 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 KLC4Q9NSK0 619 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 VWA5AO00534 786 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 EXTL3O43909 919 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 CYP1A1P04798 512 aaPredicted RBP19.4■□□□□ 0.7
TDP2-202ENST00000378198 CENPCQ03188 943 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.4■□□□□ 0.7
TDP2-202ENST00000378198 ZNF516Q92618 1163 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 ELMO3Q96BJ8 720 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 TEPSINQ96N21 525 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 DCLK3Q9C098 648 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 ATP6V0A4Q9HBG4 840 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 AAASQ9NRG9 546 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 CHST7Q9NS84 486 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 HOMER3Q9NSC5 361 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 RNF146Q9NTX7 359 aa19.4■□□□□ 0.7
TDP2-202ENST00000378198 CCT8L1PA6NM43 557 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 TP73O15350 636 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 RRM1P23921 792 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 NSFP46459 744 aaKnown RBP19.39■□□□□ 0.69
TDP2-202ENST00000378198 SCTRP47872 440 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 TNFAIP1Q13829 316 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 PSMD6Q15008 389 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 CNGA2Q16280 664 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 EXOC3L1Q86VI1 746 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 LRRC34Q8IZ02 419 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 ATL2Q8NHH9 583 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 CPA5Q8WXQ8 436 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 DDX27Q96GQ7 796 aaKnown RBP19.39■□□□□ 0.69
TDP2-202ENST00000378198 NSRP1Q9H0G5 558 aaKnown RBP19.39■□□□□ 0.69
TDP2-202ENST00000378198 SAMD15Q9P1V8 674 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 ARHGAP28Q9P2N2 729 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 SIP14410 1827 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 KCNA2P16389 499 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 IVDP26440 423 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 CXCL9Q07325 125 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 MTMR2Q13614 643 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 SPRED3Q2MJR0 410 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 SWSAP1Q6NVH7 229 aa19.39■□□□□ 0.69
TDP2-202ENST00000378198 TAS1R3Q7RTX0 852 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms