RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 MYADML2A6NDP7 307 aa11.98□□□□□ -0.49
PDPN-202ENST00000376057 RCCD1A6NED2 376 aa11.98□□□□□ -0.49
PDPN-202ENST00000376057 FKTNO75072 461 aa11.98□□□□□ -0.49
PDPN-202ENST00000376057 CAND2O75155 1236 aa11.98□□□□□ -0.49
PDPN-202ENST00000376057 ASS1P00966 412 aaKnown RBP11.98□□□□□ -0.49
PDPN-202ENST00000376057 C6orf222P0C671 652 aaPredicted RBP11.98□□□□□ -0.49
PDPN-202ENST00000376057 GZMAP12544 262 aa11.98□□□□□ -0.49
PDPN-202ENST00000376057 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
PDPN-202ENST00000376057 ATICP31939 592 aa11.98□□□□□ -0.49
PDPN-202ENST00000376057 SLC27A1Q6PCB7 646 aa11.98□□□□□ -0.49
PDPN-202ENST00000376057 ZBTB33Q86T24 672 aa11.98□□□□□ -0.49
PDPN-202ENST00000376057 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.98□□□□□ -0.49
PDPN-202ENST00000376057 FANCGO15287 622 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 TREHO43280 583 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 STAG3L1P0CL83 205 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 PPP1R2P3Q6NXS1 205 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 NOTUMQ6P988 496 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 TRAPPC11Q7Z392 1133 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 SERINC5Q86VE9 423 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 TRIM58Q8NG06 486 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 WDR24Q96S15 920 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 AGPAT1Q99943 283 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 LACRTQ9GZZ8 138 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 NOCTQ9UK39 431 aaKnown RBP11.97□□□□□ -0.49
PDPN-202ENST00000376057 R3HCC1Q9Y3T6 440 aaKnown RBP11.97□□□□□ -0.49
PDPN-202ENST00000376057 PDCD11Q14690 1871 aaKnown RBP11.97□□□□□ -0.49
PDPN-202ENST00000376057 DDX3XO00571 662 aaKnown RBP eCLIP11.97□□□□□ -0.49
PDPN-202ENST00000376057 CTIFO43310 598 aaKnown RBP11.97□□□□□ -0.49
PDPN-202ENST00000376057 TRPA1O75762 1119 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 PRLRP16471 622 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 PIK3CAP42336 1068 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 CYP27A1Q02318 531 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 SNX17Q15036 470 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 MROH7Q68CQ1 1323 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 RSPH3Q86UC2 560 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 CD99L2Q8TCZ2 262 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 SECISBP2LQ93073 1101 aaKnown RBP11.97□□□□□ -0.49
PDPN-202ENST00000376057 ANKRD36BP1Q96IX9 119 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 ADAMTS1Q9UHI8 967 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 SQORQ9Y6N5 450 aa11.97□□□□□ -0.49
PDPN-202ENST00000376057 A0A0U1RQJ8 604 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 MOXD2PA6NHM9 499 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 TNNC2P02585 160 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 ACO1P21399 889 aaKnown RBP11.96□□□□□ -0.49
PDPN-202ENST00000376057 CCND3P30281 292 aaPredicted RBP11.96□□□□□ -0.49
PDPN-202ENST00000376057 HADHBP55084 474 aaKnown RBP11.96□□□□□ -0.49
PDPN-202ENST00000376057 NCOA4Q13772 614 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 NBPF20Q3BBV1 942 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 XKR4Q5GH76 650 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 FAM26DQ5JW98 314 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 ALKBH5Q6P6C2 394 aaKnown RBP11.96□□□□□ -0.49
PDPN-202ENST00000376057 ALKAL1Q6UXT8 129 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 OR5B17Q8NGF7 314 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 CXorf38Q8TB03 319 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 ATRIPQ8WXE1 791 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 CELF4Q9BZC1 486 aaKnown RBP11.96□□□□□ -0.49
PDPN-202ENST00000376057 ISCUQ9H1K1 167 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 CHST12Q9NRB3 414 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 CTAGE9A4FU28 777 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 TUBB4BP68371 445 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 CUL2Q13617 745 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 ZNF569Q5MCW4 686 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 PAPD7Q5XG87 772 aaKnown RBP11.96□□□□□ -0.49
PDPN-202ENST00000376057 PPM1KQ8N3J5 372 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 LNX1Q8TBB1 728 aaPredicted RBP11.96□□□□□ -0.49
PDPN-202ENST00000376057 DNAJB3Q8WWF6 145 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 ACAP3Q96P50 834 aa11.96□□□□□ -0.49
PDPN-202ENST00000376057 NAPGQ99747 312 aaPredicted RBP11.96□□□□□ -0.49
PDPN-202ENST00000376057 NCANO14594 1321 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 MEFVO15553 781 aaPredicted RBP11.96□□□□□ -0.5
PDPN-202ENST00000376057 YY1P25490 414 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 MRPS6P82932 125 aaKnown RBP11.96□□□□□ -0.5
PDPN-202ENST00000376057 MGAT3Q09327 533 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 TRIM32Q13049 653 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 IFI16Q16666 785 aaKnown RBP11.96□□□□□ -0.5
PDPN-202ENST00000376057 KIZQ2M2Z5 673 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 SLC10A6Q3KNW5 377 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 RNF180Q86T96 592 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 SLC43A3Q8NBI5 491 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 EPS8L1Q8TE68 723 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 TATDN2Q93075 761 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 TRAIPQ9BWF2 469 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 IMPG2Q9BZV3 1241 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 ITGA11Q9UKX5 1188 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 PCDHGC5Q9Y5F6 944 aa11.96□□□□□ -0.5
PDPN-202ENST00000376057 LRRN2O75325 713 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 TACC1O75410 805 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 ABL1P00519 1130 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 TMEM253P0C7T8 217 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 ZNF132P52740 706 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 YWHAEP62258 255 aaKnown RBP11.95□□□□□ -0.5
PDPN-202ENST00000376057 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
PDPN-202ENST00000376057 CDR2Q01850 454 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 KCNA10Q16322 511 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 ARHGAP44Q17R89 818 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 TMEM132AQ24JP5 1023 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 EFCAB13Q8IY85 973 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 TTC39CQ8N584 583 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 RAET1EQ8TD07 263 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 DDX1Q92499 740 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms