RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 FLT1P17948 1338 aa8.14□□□□□ -1.11
COL21A1-203ENST00000370819 PIK3R2O00459 728 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 NDUFB10O96000 172 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 CHEK2O96017 543 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 KCNA3P22001 575 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 GPSM2P81274 684 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 DYNC1I2Q13409 638 aaKnown RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 NTRK3Q16288 839 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 WDR72Q3MJ13 1102 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ARL13BQ3SXY8 428 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 TMEM154Q6P9G4 183 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 RNF139Q8WU17 664 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 THAP2Q9H0W7 228 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 FAM217BQ9NTX9 383 aaPredicted RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 DLGAP2Q9P1A6 1054 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 TRIM33Q9UPN9 1127 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 TRAF3IP3Q9Y228 551 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 C21orf2O43822 256 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 CAND2O75155 1236 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 TAC1P20366 129 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 SFNP31947 248 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 SLC1A1P43005 524 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 MAPK7Q13164 816 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 MED21Q13503 144 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 SNRNP35Q16560 246 aaKnown RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 DUOXA2Q1HG44 320 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ZBTB41Q5SVQ8 909 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 C3orf62Q6ZUJ4 267 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 EPS8L3Q8TE67 593 aaKnown RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 SH3GL3Q99963 347 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 CCDC90BQ9GZT6 254 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ZNF446Q9NWS9 450 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 DDX56Q9NY93 547 aaKnown RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ZNF711Q9Y462 761 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 DAGLAQ9Y4D2 1042 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 PCDHA10Q9Y5I2 948 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 PXDNLA1KZ92 1463 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 LOC100653049A0A140TA62 436 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ARHGAP10A1A4S6 786 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 GOLGA8CPA6NN73 597 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 E2F6O75461 281 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 KRT34O76011 436 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 YWHABP31946 246 aaKnown RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 GPC3P51654 580 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ATXN3P54252 364 aaPredicted RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 TRIP10Q15642 601 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 STXBP2Q15833 593 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 GRAMD4Q6IC98 578 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 PID1Q7Z2X4 250 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 DHX38Q92620 1227 aaKnown RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 MTMR8Q96EF0 704 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ROPN1BQ9BZX4 212 aaPredicted RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 EHD4Q9H223 541 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ROPN1Q9HAT0 212 aaPredicted RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 TUFT1Q9NNX1 390 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 KBTBD4Q9NVX7 518 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 PSMC3IPQ9P2W1 217 aaPredicted RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 CDC42BPGQ6DT37 1551 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 NEMP1O14524 444 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 SLC37A4O43826 429 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ATP9BO43861 1147 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 RPA1P27694 616 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 COILP38432 576 aaPredicted RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 INPP1P49441 399 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ARPP19P56211 112 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 AP1B1Q10567 949 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 OVGP1Q12889 678 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 STX3Q13277 289 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 CNGA3Q16281 694 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 RC3H1Q5TC82 1133 aaKnown RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 LVRNQ6Q4G3 990 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 SYDE1Q6ZW31 735 aaPredicted RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 METTL23Q86XA0 190 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 SLC13A5Q86YT5 568 aaPredicted RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ZNF34Q8IZ26 560 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ATG4AQ8WYN0 398 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 SYN2Q92777 582 aaPredicted RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 DCPSQ96C86 337 aaKnown RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 C18orf8Q96DM3 657 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 OLFM3Q96PB7 478 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 MTRQ99707 1265 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ABCF3Q9NUQ8 709 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 ZC3H7BQ9UGR2 993 aaKnown RBP8.13□□□□□ -1.11
COL21A1-203ENST00000370819 RAB21Q9UL25 225 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 L3MBTL1Q9Y468 752 aa8.13□□□□□ -1.11
COL21A1-203ENST00000370819 SPHKAPQ2M3C7 1700 aa8.12□□□□□ -1.11
COL21A1-203ENST00000370819 FOXN3O00409 490 aaPredicted RBP8.12□□□□□ -1.11
COL21A1-203ENST00000370819 KCNN4O15554 427 aa8.12□□□□□ -1.11
COL21A1-203ENST00000370819 HNRNPCP07910 306 aaKnown RBP eCLIP8.12□□□□□ -1.11
COL21A1-203ENST00000370819 PRLRP16471 622 aa8.12□□□□□ -1.11
COL21A1-203ENST00000370819 SCTRP47872 440 aa8.12□□□□□ -1.11
COL21A1-203ENST00000370819 SERPINB4P48594 390 aa8.12□□□□□ -1.11
COL21A1-203ENST00000370819 PMS1P54277 932 aaKnown RBP8.12□□□□□ -1.11
COL21A1-203ENST00000370819 GRB10Q13322 594 aa8.12□□□□□ -1.11
COL21A1-203ENST00000370819 FASTKD1Q53R41 847 aaKnown RBP8.12□□□□□ -1.11
COL21A1-203ENST00000370819 RARS2Q5T160 578 aaKnown RBP8.12□□□□□ -1.11
COL21A1-203ENST00000370819 DSTYKQ6XUX3 929 aa8.12□□□□□ -1.11
COL21A1-203ENST00000370819 ARHGAP18Q8N392 663 aa8.12□□□□□ -1.11
COL21A1-203ENST00000370819 OR6P1Q8NGX9 317 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms