RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 C17orf75Q9HAS0 396 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 DDX56Q9NY93 547 aaKnown RBP13.03□□□□□ -0.32
PTPRK-203ENST00000368207 FGFR4P22455 802 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 KCNJ1P48048 391 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 AP1B1Q10567 949 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 NIF3L1Q9GZT8 377 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 AGO4Q9HCK5 861 aaKnown RBP13.03□□□□□ -0.32
PTPRK-203ENST00000368207 CPB1P15086 417 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 ROR1Q01973 937 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 BIRC2Q13490 618 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 DGKDQ16760 1214 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 CCDC38Q502W7 563 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 TRIM42Q8IWZ5 723 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 KLHL29Q96CT2 875 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 HVCN1Q96D96 273 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 RAB3IPQ96QF0 476 aaPredicted RBP13.03□□□□□ -0.32
PTPRK-203ENST00000368207 EML1O00423 815 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 VWA5AO00534 786 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 CSDE1O75534 798 aaKnown RBP13.03□□□□□ -0.32
PTPRK-203ENST00000368207 BRD2P25440 801 aaKnown RBP13.03□□□□□ -0.32
PTPRK-203ENST00000368207 SARSP49591 514 aaKnown RBP13.03□□□□□ -0.32
PTPRK-203ENST00000368207 CAV1Q03135 178 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 DHX34Q14147 1143 aaKnown RBP13.03□□□□□ -0.32
PTPRK-203ENST00000368207 GLRA4Q5JXX5 417 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 MAP1SQ66K74 1059 aaPredicted RBP13.03□□□□□ -0.32
PTPRK-203ENST00000368207 DDX42Q86XP3 938 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPRK-203ENST00000368207 DNAAF5Q86Y56 855 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 LMNTD2Q8IXW0 634 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 ATP6V1E2Q96A05 226 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 SNF8Q96H20 258 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 SENP7Q9BQF6 1050 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 THAP2Q9H0W7 228 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 ZFYVE28Q9HCC9 887 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 LCMT1Q9UIC8 334 aa13.03□□□□□ -0.32
PTPRK-203ENST00000368207 P4HA2O15460 535 aa13.02□□□□□ -0.32
PTPRK-203ENST00000368207 SLC1A1P43005 524 aa13.02□□□□□ -0.32
PTPRK-203ENST00000368207 PGM5Q15124 567 aa13.02□□□□□ -0.32
PTPRK-203ENST00000368207 KIAA1755Q5JYT7 1200 aa13.02□□□□□ -0.32
PTPRK-203ENST00000368207 LRRC31Q6UY01 552 aa13.02□□□□□ -0.32
PTPRK-203ENST00000368207 C15orf52Q6ZUT6 534 aaKnown RBP13.02□□□□□ -0.32
PTPRK-203ENST00000368207 APPL2Q8NEU8 664 aa13.02□□□□□ -0.32
PTPRK-203ENST00000368207 UBA3Q8TBC4 463 aa13.02□□□□□ -0.32
PTPRK-203ENST00000368207 DNAJC7Q99615 494 aa13.02□□□□□ -0.32
PTPRK-203ENST00000368207 BLOC1S4Q9NUP1 217 aa13.02□□□□□ -0.32
PTPRK-203ENST00000368207 BRAFP15056 766 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 PMLP29590 882 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 EIF3EP60228 445 aaKnown RBP13.02□□□□□ -0.33
PTPRK-203ENST00000368207 TAP1Q03518 808 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 MTM1Q13496 603 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 ATL2Q8NHH9 583 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 PDCD6IPQ8WUM4 868 aaKnown RBP13.02□□□□□ -0.33
PTPRK-203ENST00000368207 PACSIN1Q9BY11 444 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 SPATC1LQ9H0A9 340 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 CAPN6Q9Y6Q1 641 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 TARSL2A2RTX5 802 aaKnown RBP13.02□□□□□ -0.33
PTPRK-203ENST00000368207 ADM5C9JUS6 153 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 COPEO14579 308 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 RPS6KA5O75582 802 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 NPTXRO95502 500 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 ITGB3P05106 788 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 SPATA24Q86W54 205 aa13.02□□□□□ -0.33
PTPRK-203ENST00000368207 GLIS2Q9BZE0 524 aaPredicted RBP13.02□□□□□ -0.33
PTPRK-203ENST00000368207 MAP3K20Q9NYL2 800 aaKnown RBP13.02□□□□□ -0.33
PTPRK-203ENST00000368207 ZBBXA8MT70 800 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 SLITRK3O94933 977 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 DSG3P32926 999 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 RARRES1P49788 294 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 ORC1Q13415 861 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 MMEL1Q495T6 779 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 RIN2Q8WYP3 895 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-203ENST00000368207 SYN2Q92777 582 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-203ENST00000368207 PITPNM3Q9BZ71 974 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
PTPRK-203ENST00000368207 KLK14Q9P0G3 267 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 USP20Q9Y2K6 914 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 SNRPFP62306 86 aaKnown RBP13.01□□□□□ -0.33
PTPRK-203ENST00000368207 DMTNQ08495 405 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 LRRC14Q15048 493 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 BTBD8Q5XKL5 378 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 OTOP1Q7RTM1 612 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 EFCAB13Q8IY85 973 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 GTF3C2Q8WUA4 911 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-203ENST00000368207 MAML1Q92585 1016 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 HPDLQ96IR7 371 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 SPON2Q9BUD6 331 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 NT5C1AQ9BXI3 368 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 FSD1LQ9BXM9 530 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 VCX3BQ9H321 246 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 ZBTB24O43167 697 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-203ENST00000368207 SGPL1O95470 568 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 HERVK_113P62684 666 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 SMTNL2Q2TAL5 461 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 ZNF449Q6P9G9 518 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 TAS1R2Q8TE23 839 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 OPTNQ96CV9 577 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 KATNAL1Q9BW62 490 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 MTMR12Q9C0I1 747 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 OGTO15294 1046 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 RAD51CO43502 376 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms