RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 JCADQ9P266 1359 aa12.88□□□□□ -0.35
CCDC144A-204ENST00000360524 UBA6A0AVT1 1052 aaPredicted RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 EFNA5P52803 228 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 CCDC15Q0P6D6 951 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 FASTKD1Q53R41 847 aaKnown RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 FAM102AQ5T9C2 384 aaPredicted RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 HAUS6Q7Z4H7 955 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 ZNF560Q96MR9 790 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 DBR1Q9UK59 544 aaKnown RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 FLT1P17948 1338 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 ATP9BO43861 1147 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 KDSRQ06136 332 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 DCAF4L1Q3SXM0 396 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 EFHC2Q5JST6 749 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 SLC30A5Q8TAD4 765 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 DNAJC9Q8WXX5 260 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 VIPAS39Q9H9C1 493 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 CHCHD3Q9NX63 227 aaKnown RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 SFMBT1Q9UHJ3 866 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 ATXN3P54252 364 aaPredicted RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 CACNB2Q08289 660 aaPredicted RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 SPATA21Q7Z572 469 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 FRMD5Q7Z6J6 570 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 CHP1Q99653 195 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 MAGEB5Q9BZ81 275 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 ZCWPW1Q9H0M4 648 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 GIMAP4Q9NUV9 329 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 DLGAP2Q9P1A6 1054 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 DEAF1O75398 565 aaPredicted RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 SCP2P22307 547 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 HSPA9P38646 679 aaKnown RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 PDIA5Q14554 519 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 LRRC36Q1X8D7 754 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 OR2W6PQ8NHA6 318 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 GRAMD1AQ96CP6 724 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 TIPINQ9BVW5 301 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 PRDM5Q9NQX1 630 aaPredicted RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 HLA-DPA1P20036 260 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 NMT1P30419 496 aaKnown RBP12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 DUOXA2Q1HG44 320 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 TAS2R42Q7RTR8 314 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 SPATA4Q8NEY3 305 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 OR6J1Q8NGC5 347 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 AGPAT1Q99943 283 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 EGFL8Q99944 293 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 FAM118BQ9BPY3 351 aa12.87□□□□□ -0.35
CCDC144A-204ENST00000360524 PNPLA6Q8IY17 1366 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 FAM205CA6NFA0 338 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 CHN1P15882 459 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 PGM1P36871 562 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 STAT5BP51692 787 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 CPA5Q8WXQ8 436 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 RNPC3Q96LT9 517 aaKnown RBP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 GTPBP10A4D1E9 387 aaKnown RBP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 SOX11P35716 441 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 COG2Q14746 738 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 SF3B3Q15393 1217 aaKnown RBP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 RHOT1Q8IXI2 618 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 ULK4Q96C45 1275 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 SIK2Q9H0K1 926 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 AURKCQ9UQB9 309 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 ARL2BPQ9Y2Y0 163 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 NEMP1O14524 444 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 AARSP49588 968 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 CTCFP49711 727 aaPredicted RBP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 EXOSC10Q01780 885 aaKnown RBP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 KCNB1Q14721 858 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 CCDC85BQ15834 202 aaPredicted RBP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 VPS72Q15906 364 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 SBK1Q52WX2 424 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 RABGAP1LQ5R372 815 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 CDKL3Q8IVW4 592 aaPredicted RBP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 ZNF34Q8IZ26 560 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 SH3GL2Q99962 352 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 NPHS2Q9NP85 383 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 CCDC78A2IDD5 438 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 TMEM247A6NEH6 219 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 FAM187AA6NFU0 413 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 PRKCBP05771 671 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 NNMTP40261 264 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 TKFCQ3LXA3 575 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 TEKT4Q8WW24 435 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 SP110Q9HB58 689 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 FBXO2Q9UK22 296 aaPredicted RBP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 KLK7P49862 253 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 CDH6P55285 790 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 TAP1Q03518 808 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 ZNF543Q08ER8 600 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 LAMB3Q13751 1172 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 ITPRIPL1Q6GPH6 555 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 STOX1Q6ZVD7 989 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 PAWRQ96IZ0 340 aaKnown RBP12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 UNC45AQ9H3U1 944 aa12.86□□□□□ -0.35
CCDC144A-204ENST00000360524 PHF20L1A8MW92 1017 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 PDXKO00764 312 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 TRIM60Q495X7 471 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms