RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 C2CD6Q53TS8 623 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 CHADLQ6NUI6 762 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 ENOSF1Q7L5Y1 443 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 TAOK1Q7L7X3 1001 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 RDM1Q8NG50 284 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 CPA5Q8WXQ8 436 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 SLCO2A1Q92959 643 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 C17orf75Q9HAS0 396 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 RNF146Q9NTX7 359 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 WHRNQ9P202 907 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 ZNRF3Q9ULT6 936 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 TNS1Q9HBL0 1735 aaKnown RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 UNGP13051 313 aaPredicted RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 BAATQ14032 418 aaPredicted RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 TRIP13Q15645 432 aaPredicted RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 LONRF1Q17RB8 773 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 LLGL2Q6P1M3 1020 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 TRMT10CQ7L0Y3 403 aaKnown RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 CCDC50Q8IVM0 306 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 MCOLN2Q8IZK6 566 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 SAMD3Q8N6K7 520 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 ANKS4BQ8N8V4 417 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 WNK4Q96J92 1243 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 NTPCRQ9BSD7 190 aaKnown RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 SLC40A1Q9NP59 571 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 MYOZ2Q9NPC6 264 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 PARP14Q460N5 1801 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 SORBS3O60504 671 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 ZC3H11AO75152 810 aaKnown RBP eCLIP9.17□□□□□ -0.94
RFX3-202ENST00000358730 GAS8O95995 478 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 VIMP08670 466 aaKnown RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 GARTP22102 1010 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 CHKAP35790 457 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 PIK3CAP42336 1068 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 NSFP46459 744 aaKnown RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 BRDTQ58F21 947 aaPredicted RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 DAB2IPQ5VWQ8 1189 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 MFSD5Q6N075 450 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 LRRC34Q8IZ02 419 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 MCPH1Q8NEM0 835 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 P3H4Q92791 437 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 ATG4CQ96DT6 458 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 SNF8Q96H20 258 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 ZBED3Q96IU2 234 aaPredicted RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 JPH2Q9BR39 696 aaPredicted RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 HERPUD2Q9BSE4 406 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 AVENQ9NQS1 362 aaPredicted RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 AAASQ9NRG9 546 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 DNAJC17Q9NVM6 304 aaKnown RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 SAMD15Q9P1V8 674 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.17□□□□□ -0.94
RFX3-202ENST00000358730 RIPK3Q9Y572 518 aa9.17□□□□□ -0.94
RFX3-202ENST00000358730 COL11A1P12107 1806 aaPredicted RBP9.17□□□□□ -0.94
RFX3-202ENST00000358730 MYPNQ86TC9 1320 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 MYH9P35579 1960 aaKnown RBP9.16□□□□□ -0.94
RFX3-202ENST00000358730 TP73O15350 636 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 DGAT1O75907 488 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 NR3C2P08235 984 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 ATF2P15336 505 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 TNNI1P19237 187 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 MAN1A1P33908 653 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 SCTRP47872 440 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 VPS41P49754 854 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 LIG4P49917 911 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 PRKCEQ02156 737 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 WDR44Q5JSH3 913 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 SWSAP1Q6NVH7 229 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 PASD1Q8IV76 773 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 MAIP1Q8WWC4 291 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 CCT6BQ92526 530 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 GPRASP2Q96D09 838 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 TRIM11Q96F44 468 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 IFT74Q96LB3 600 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 FAM81BQ96LP2 452 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 FNBP1Q96RU3 617 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 POLR3FQ9H1D9 316 aaPredicted RBP9.16□□□□□ -0.94
RFX3-202ENST00000358730 ATP6V0A4Q9HBG4 840 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 XPNPEP1Q9NQW7 623 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 TELO2Q9Y4R8 837 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 PCDHB2Q9Y5E7 798 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 VWA5AO00534 786 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 ASAP2O43150 1006 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 DKC1O60832 514 aaKnown RBP eCLIP9.16□□□□□ -0.94
RFX3-202ENST00000358730 RASSF9O75901 435 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 PSAPP07602 524 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 MYBL1P10243 752 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 SLC1A1P43005 524 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 CXCL9Q07325 125 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 PTK6Q13882 451 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 TNFAIP8L3Q5GJ75 292 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 TAS1R3Q7RTX0 852 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 VSIG10LQ86VR7 867 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 CCDC60Q8IWA6 550 aaPredicted RBP9.16□□□□□ -0.94
RFX3-202ENST00000358730 MGARPQ8TDB4 240 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 IPO4Q8TEX9 1081 aaKnown RBP9.16□□□□□ -0.94
RFX3-202ENST00000358730 GRK7Q8WTQ7 553 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 DYDC1Q8WWB3 177 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 ZNF516Q92618 1163 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 C11orf70Q9BRQ4 267 aa9.16□□□□□ -0.94
RFX3-202ENST00000358730 ROPN1BQ9BZX4 212 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms